RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 USO1O60763 962 aaKnown RBP10.02□□□□□ -0.81
CHD8-214ENST00000557727 PLA2G4BP0C869 781 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 RSPH10BP0C881 870 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 GLRA2P23416 452 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 CMA1P23946 247 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 MDM2Q00987 491 aaPredicted RBP10.02□□□□□ -0.81
CHD8-214ENST00000557727 MCM6Q14566 821 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 LPIN1Q14693 890 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 ZRSR1Q15695 479 aaKnown RBP10.02□□□□□ -0.81
CHD8-214ENST00000557727 FBXO47Q5MNV8 452 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 NME8Q8N427 588 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 METTL13Q8N6R0 699 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
CHD8-214ENST00000557727 CELF4Q9BZC1 486 aaKnown RBP10.02□□□□□ -0.81
CHD8-214ENST00000557727 AGO3Q9H9G7 860 aaKnown RBP10.02□□□□□ -0.81
CHD8-214ENST00000557727 SUGCTQ9HAC7 445 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 IFT122Q9HBG6 1241 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 POLD4Q9HCU8 107 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 DNM3Q9UQ16 869 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 TRIP11Q15643 1979 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 NPHP3-ACAD11A0A0J9YXS1 232 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 A0A1B0GVL5 298 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 ARHGEF35A5YM69 484 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 GAS2O43903 313 aaKnown RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 RPLP2P05387 115 aaKnown RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 PFKFB1P16118 471 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 GUCY2CP25092 1073 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 POLGP54098 1239 aaPredicted RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 NLRP11P59045 1033 aaKnown RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 LAMTOR4Q0VGL1 99 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 CAPSQ13938 189 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 KIZQ2M2Z5 673 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 PLEKHG4Q58EX7 1191 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 RASIP1Q5U651 963 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 IER5Q5VY09 327 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 CCDC155Q8N6L0 562 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 PDILTQ8N807 584 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 ENGASEQ8NFI3 743 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 PRPF31Q8WWY3 499 aaKnown RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 SLC7A3Q8WY07 619 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 LARP4BQ92615 738 aaKnown RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 CALML4Q96GE6 196 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 ZNF668Q96K58 619 aaPredicted RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 PPP1R16BQ96T49 567 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 POLR3FQ9H1D9 316 aaPredicted RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 MINDY3Q9H8M7 445 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 SUCLA2Q9P2R7 463 aaPredicted RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 STK17AQ9UEE5 414 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 TRPV2Q9Y5S1 764 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 FNDC1Q4ZHG4 1894 aaPredicted RBP10.01□□□□□ -0.81
CHD8-214ENST00000557727 ADGRA3Q8IWK6 1321 aa10.01□□□□□ -0.81
CHD8-214ENST00000557727 CHD9Q3L8U1 2897 aa10□□□□□ -0.81
CHD8-214ENST00000557727 MYMKA6NI61 221 aa10□□□□□ -0.81
CHD8-214ENST00000557727 GADD45BO75293 160 aaPredicted RBP10□□□□□ -0.81
CHD8-214ENST00000557727 ACRP10323 421 aa10□□□□□ -0.81
CHD8-214ENST00000557727 FECHP22830 423 aa10□□□□□ -0.81
CHD8-214ENST00000557727 BMP8BP34820 402 aa10□□□□□ -0.81
CHD8-214ENST00000557727 RFC2P35250 354 aa10□□□□□ -0.81
CHD8-214ENST00000557727 NDUFA8P51970 172 aa10□□□□□ -0.81
CHD8-214ENST00000557727 ZNF131P52739 623 aa10□□□□□ -0.81
CHD8-214ENST00000557727 CRYBB1P53674 252 aaPredicted RBP10□□□□□ -0.81
CHD8-214ENST00000557727 FPGSQ05932 587 aa10□□□□□ -0.81
CHD8-214ENST00000557727 SNW1Q13573 536 aaKnown RBP10□□□□□ -0.81
CHD8-214ENST00000557727 TMEM240Q5SV17 173 aa10□□□□□ -0.81
CHD8-214ENST00000557727 C9orf50Q5SZB4 431 aa10□□□□□ -0.81
CHD8-214ENST00000557727 RRAGBQ5VZM2 374 aa10□□□□□ -0.81
CHD8-214ENST00000557727 CDCA2Q69YH5 1023 aaPredicted RBP10□□□□□ -0.81
CHD8-214ENST00000557727 CCDC73Q6ZRK6 1079 aa10□□□□□ -0.81
CHD8-214ENST00000557727 RHPN2Q8IUC4 686 aa10□□□□□ -0.81
CHD8-214ENST00000557727 EXOC8Q8IYI6 725 aa10□□□□□ -0.81
CHD8-214ENST00000557727 MCPH1Q8NEM0 835 aa10□□□□□ -0.81
CHD8-214ENST00000557727 PSPC1Q8WXF1 523 aaKnown RBP10□□□□□ -0.81
CHD8-214ENST00000557727 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
CHD8-214ENST00000557727 DNAJC19Q96DA6 116 aa10□□□□□ -0.81
CHD8-214ENST00000557727 FIZ1Q96SL8 496 aa10□□□□□ -0.81
CHD8-214ENST00000557727 OSMRQ99650 979 aa10□□□□□ -0.81
CHD8-214ENST00000557727 JPH2Q9BR39 696 aaPredicted RBP10□□□□□ -0.81
CHD8-214ENST00000557727 BUD13Q9BRD0 619 aaKnown RBP eCLIP10□□□□□ -0.811e-13■■■■□ 23.3
CHD8-214ENST00000557727 TMX1Q9H3N1 280 aa10□□□□□ -0.81
CHD8-214ENST00000557727 ERVK-5Q9HDB9 667 aa10□□□□□ -0.81
CHD8-214ENST00000557727 IL23AQ9NPF7 189 aa10□□□□□ -0.81
CHD8-214ENST00000557727 KCND2Q9NZV8 630 aa10□□□□□ -0.81
CHD8-214ENST00000557727 KCNH3Q9ULD8 1083 aa10□□□□□ -0.81
CHD8-214ENST00000557727 AKT3Q9Y243 479 aa10□□□□□ -0.81
CHD8-214ENST00000557727 NOC2LQ9Y3T9 749 aaKnown RBP10□□□□□ -0.81
CHD8-214ENST00000557727 COL4A3BPQ9Y5P4 624 aa10□□□□□ -0.81
CHD8-214ENST00000557727 SQORQ9Y6N5 450 aa10□□□□□ -0.81
CHD8-214ENST00000557727 KIAA1671Q9BY89 1806 aa10□□□□□ -0.81
CHD8-214ENST00000557727 A0A087WZ62 844 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 FRMD3A2A2Y4 597 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 TNFRSF10AO00220 468 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 GPR37O15354 613 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 POLR2DO15514 142 aaKnown RBP9.99□□□□□ -0.81
CHD8-214ENST00000557727 HIP1RO75146 1068 aa9.99□□□□□ -0.81
CHD8-214ENST00000557727 PARNO95453 639 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms