RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 RSPH1Q8WYR4 309 aa12.04□□□□□ -0.48
HNRNPC-230ENST00000557201 NECTIN4Q96NY8 510 aa12.04□□□□□ -0.48
HNRNPC-230ENST00000557201 SH2D3AQ9BRG2 576 aa12.04□□□□□ -0.48
HNRNPC-230ENST00000557201 FDXACB1Q9BRP7 624 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-230ENST00000557201 LARP6Q9BRS8 491 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-230ENST00000557201 ZDBF2Q9HCK1 2354 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 C2CD4DB7Z1M9 353 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 B4GALT3O60512 393 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 PDGFBP01127 241 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 GALTP07902 379 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 ALDH7A1P49419 539 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 ME3Q16798 604 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 ANO5Q75V66 913 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 DDX53Q86TM3 631 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 VPS52Q8N1B4 723 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 KREMEN2Q8NCW0 462 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 SLC22A17Q8WUG5 538 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 LPPQ93052 612 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 IGSF21Q96ID5 467 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 RIPOR3Q96MK2 946 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 SCLT1Q96NL6 688 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 VN1R3Q9BXE9 311 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 IFT122Q9HBG6 1241 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 TBC1D13Q9NVG8 400 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 SEPT9Q9UHD8 586 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
HNRNPC-230ENST00000557201 MYO15AQ9UKN7 3530 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 EML1O00423 815 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 OFD1O75665 1012 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 BRD1O95696 1058 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 CXCL14O95715 111 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 CTSAP10619 480 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 SFPQP23246 707 aaKnown RBP eCLIP12.02□□□□□ -0.499e-7■■■□□ 16.4
HNRNPC-230ENST00000557201 SP100P23497 879 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 POLGP54098 1239 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 KSR1Q8IVT5 923 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 BLIDQ8IZY5 108 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 FAM177A1Q8N128 213 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 AUTS2Q8WXX7 1259 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 TMEM169Q96HH4 297 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 KCNMB3Q9NPA1 279 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 FAM105AQ9NUU6 356 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 SUCLA2Q9P2R7 463 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 VAV3Q9UKW4 847 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 SORCS3Q9UPU3 1222 aa12.02□□□□□ -0.49
HNRNPC-230ENST00000557201 CARNS1A5YM72 827 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 SLC37A4O43826 429 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 ZC3H11AO75152 810 aaKnown RBP eCLIP12.01□□□□□ -0.495e-13■■□□□ 12.3
HNRNPC-230ENST00000557201 DEXIO95424 95 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 SKIP12755 728 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 EPCAMP16422 314 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 MTHFRP42898 656 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 DNM2P50570 870 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 NUBP1P53384 320 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 PSMC5P62195 406 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 SSRP1Q08945 709 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 SCRN1Q12765 414 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 PPP2R5CQ13362 524 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 NOMO2Q5JPE7 1267 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 GALNT17Q6IS24 598 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 KIAA1841Q6NSI8 718 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 CES5AQ6NT32 575 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 KANK3Q6NY19 840 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 CPLX2Q6PUV4 134 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 MRPL10Q7Z7H8 261 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 RHPN2Q8IUC4 686 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 TRIM22Q8IYM9 498 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 UBALD2Q8IYN6 164 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 ZDHHC14Q8IZN3 488 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 C12orf76Q8N812 135 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 AIFM3Q96NN9 605 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 INO80BQ9C086 356 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 SMOC2Q9H3U7 446 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 DZANK1Q9NVP4 752 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 WRAP73Q9P2S5 460 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 DNAJB4Q9UDY4 337 aa12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-230ENST00000557201 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 DDX11L8A8MPP1 907 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 CPLX1O14810 134 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 LILRB3O75022 631 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 WEE2P0C1S8 567 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 HOXA11P31270 313 aaPredicted RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 SLC11A1P49279 550 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 RAB27AP51159 221 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
HNRNPC-230ENST00000557201 STK3Q13188 491 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 MTMR3Q13615 1198 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 GIT2Q14161 759 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 PTPN14Q15678 1187 aa12□□□□□ -0.49
HNRNPC-230ENST00000557201 LONRF3Q496Y0 759 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms