RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 CA4P22748 312 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ICA1Q05084 483 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 NTRK3Q16288 839 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 P3H1Q32P28 736 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CCDC14Q49A88 953 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 BARGINQ6ZT62 677 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 RASSF3Q86WH2 238 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 RHOT2Q8IXI1 618 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 SLC30A5Q8TAD4 765 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ZC3H12CQ9C0D7 883 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 BHMT2Q9H2M3 363 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 MEGF6O75095 1541 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 SYNJ2BP-COX16A0A087WUM0 186 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 STK10O94804 968 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CPP00450 1065 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 NMT1P30419 496 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 RNASELQ05823 741 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 PDIA2Q13087 525 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 GEN1Q17RS7 908 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 OLFML2BQ68BL8 750 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 C4orf33Q8N1A6 199 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 NGLY1Q96IV0 654 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 PPP1R36Q96LQ0 422 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 PLA2G12BQ9BX93 195 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 WNT8AQ9H1J5 351 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 COX16Q9P0S2 106 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CNOT8Q9UFF9 292 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 HAO1Q9UJM8 370 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 PIK3C2AO00443 1686 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 FSBPO95073 299 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 KLRK1P26718 216 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 HSPA2P54652 639 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 GALCP54803 685 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ZNF844Q08AG5 666 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 QPCTQ16769 361 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 FAM98CQ17RN3 349 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 FRMD5Q7Z6J6 570 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 RNF25Q96BH1 459 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 REEP2Q9BRK0 252 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 TUBB6Q9BUF5 446 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 KMT5AQ9NQR1 393 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 SMYD2Q9NRG4 433 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ARHGAP20Q9P2F6 1191 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 MINPP1Q9UNW1 487 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 PPEF1O14829 653 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CFLARO15519 480 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CYP26A1O43174 497 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 DNAJC8O75937 253 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ATP5HO75947 161 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 SHBGP04278 402 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ITGA8P53708 1063 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 DYNC1I2Q13409 638 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 SLC29A2Q14542 456 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 HADHQ16836 314 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 TBC1D9BQ66K14 1250 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CENPUQ71F23 418 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CREG2Q8IUH2 290 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 PYROXD1Q8WU10 500 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CPA5Q8WXQ8 436 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 RFFLQ8WZ73 363 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 GLG1Q92896 1179 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 TRAIPQ9BWF2 469 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 PPARGC1AQ9UBK2 798 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ZBTB12Q9Y330 459 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ADAMTS13Q76LX8 1427 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ERVV-1B6SEH8 477 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 SLC16A3O15427 465 aaKnown RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 CYP19A1P11511 503 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 IL6STP40189 918 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 GPS1Q13098 491 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ITGB3BPQ13352 177 aaPredicted RBP5.33□□□□□ -1.56
SYNE2-223ENST00000557005 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 FAF2Q96CS3 445 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ERP27Q96DN0 273 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 THAP2Q9H0W7 228 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 ATP6V0A4Q9HBG4 840 aa5.33□□□□□ -1.56
SYNE2-223ENST00000557005 TNS3Q68CZ2 1445 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 IQANK1A0A1B0GTG1 560 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 NVLO15381 856 aaKnown RBP5.32□□□□□ -1.56
SYNE2-223ENST00000557005 HSPA6P17066 643 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 LMNB2Q03252 620 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 CRYMQ14894 314 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 DBN1Q16643 649 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 LRRC36Q1X8D7 754 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 ABCB5Q2M3G0 1257 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 BBS9Q3SYG4 887 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 ANKRD20A4Q4UJ75 823 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 ZC2HC1CQ53FD0 456 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-223ENST00000557005 ANKRD20A2Q5SQ80 823 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 ANKRD20A1Q5TYW2 823 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 RINT1Q6NUQ1 792 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 RNF168Q8IYW5 571 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-223ENST00000557005 NME8Q8N427 588 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 DEPTORQ8TB45 409 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 ZNF512BQ96KM6 892 aaPredicted RBP5.32□□□□□ -1.56
SYNE2-223ENST00000557005 TMEM237Q96Q45 408 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 EIF2AK1Q9BQI3 630 aaKnown RBP5.32□□□□□ -1.56
SYNE2-223ENST00000557005 AGXT2Q9BYV1 514 aa5.32□□□□□ -1.56
SYNE2-223ENST00000557005 TRIM55Q9BYV6 548 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms