RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 GBP3Q9H0R5 595 aa10.18□□□□□ -0.78
HNRNPC-227ENST00000556897 KCNK12Q9HB15 430 aa10.18□□□□□ -0.78
HNRNPC-227ENST00000556897 C6orf50Q9HD87 102 aa10.18□□□□□ -0.78
HNRNPC-227ENST00000556897 DNAJB4Q9UDY4 337 aa10.18□□□□□ -0.78
HNRNPC-227ENST00000556897 NAP1L2Q9ULW6 460 aaPredicted RBP10.18□□□□□ -0.78
HNRNPC-227ENST00000556897 PIN4Q9Y237 131 aaKnown RBP10.18□□□□□ -0.78
HNRNPC-227ENST00000556897 DENND4AQ7Z401 1863 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 A0A087WZ62 844 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 TMEM150BA6NC51 233 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 MSH4O15457 936 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 NARSO43776 548 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 B4GALT3O60512 393 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 GAS7O60861 476 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 OFD1O75665 1012 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 CNPP09543 421 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 SFPQP23246 707 aaKnown RBP eCLIP10.17□□□□□ -0.789e-7■■■□□ 16.4
HNRNPC-227ENST00000556897 KLRC2P26717 231 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 CIITAP33076 1130 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 ADD1P35611 737 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 SLC11A1P49279 550 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 TARBP2Q15633 366 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 LETM2Q2VYF4 491 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 ADCK5Q3MIX3 580 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 NOMO2Q5JPE7 1267 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 ZNF280BQ86YH2 543 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 DTWD2Q8NBA8 298 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 RSPH1Q8WYR4 309 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 YTHDC1Q96MU7 727 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 KLHL5Q96PQ7 755 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 SH2D3AQ9BRG2 576 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 FDXACB1Q9BRP7 624 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 TRAIPQ9BWF2 469 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 FAM105AQ9NUU6 356 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 SEPT9Q9UHD8 586 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 DUSP12Q9UNI6 340 aa10.17□□□□□ -0.78
HNRNPC-227ENST00000556897 WDR87Q6ZQQ6 2873 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 ZNF292O60281 2723 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 CARNS1A5YM72 827 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 EDIL3O43854 480 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 SKIP12755 728 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 GNA11P29992 359 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 CLCN4P51793 760 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 JAK3P52333 1124 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 CDC42EP1Q00587 391 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 MTERF2Q49AM1 385 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 LRCH2Q5VUJ6 765 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 RHPN2Q8IUC4 686 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 KSR1Q8IVT5 923 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 RASEFQ8IZ41 740 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 KCNG4Q8TDN1 519 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 CCDC12Q8WUD4 166 aaPredicted RBP10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 RSAD2Q8WXG1 361 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 RIT2Q99578 217 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 RTP3Q9BQQ7 232 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 EMILIN2Q9BXX0 1053 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 NIFKQ9BYG3 293 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 UNC45AQ9H3U1 944 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 CEP250Q9BV73 2442 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 OTOGLQ3ZCN5 2332 aa10.16□□□□□ -0.78
HNRNPC-227ENST00000556897 C2orf16Q68DN1 1984 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 NCOR2Q9Y618 2525 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 IGKV6-21A0A0C4DH24 114 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 STK25O00506 426 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 C2CD2LO14523 706 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 N4BP1O75113 896 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 ZNF623O75123 536 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 DDHD2O94830 711 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 STBD1O95210 358 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 CFHP08603 1231 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 MYBP10242 640 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 SFNP31947 248 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 DNM2P50570 870 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 RAB27AP51159 221 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 AFF1P51825 1210 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 RCAN1P53805 252 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 FGD1P98174 961 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 C15orf39Q6ZRI6 1047 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 CATSPER4Q7RTX7 472 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 ZNF410Q86VK4 478 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 SLC5A5Q92911 643 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 NLRP4Q96MN2 994 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 TEKT3Q9BXF9 490 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 MAN1C1Q9NR34 630 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 MRPL17Q9NRX2 175 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 IGSF9Q9P2J2 1179 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 SUCLA2Q9P2R7 463 aaPredicted RBP10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 PCDHB2Q9Y5E7 798 aa10.15□□□□□ -0.78
HNRNPC-227ENST00000556897 GPR179Q6PRD1 2367 aa10.15□□□□□ -0.79
HNRNPC-227ENST00000556897 DMXL1Q9Y485 3027 aa10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 KRBA1A5PL33 1030 aa10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 PRPF3O43395 683 aaKnown RBP10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 LILRB3O75022 631 aa10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 LMNAP02545 664 aaKnown RBP10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 CPA1P15085 419 aa10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 RFX1P22670 979 aa10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 GBP2P32456 591 aaPredicted RBP10.14□□□□□ -0.79
HNRNPC-227ENST00000556897 AK2P54819 239 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms