RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CNKSR1Q969H4 720 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 DYDC2Q96IM9 177 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 CSRNP1Q96S65 589 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 HSD17B14Q9BPX1 270 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 RAB17Q9H0T7 212 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 EPN3Q9H201 632 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 GOLPH3Q9H4A6 298 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 FAM114A2Q9NRY5 505 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 HERC5Q9UII4 1024 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 DNAJC12Q9UKB3 198 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 NENFQ9UMX5 172 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 COL2A1P02458 1487 aaPredicted RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 IGLV3-22A0A075B6J6 115 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 ARHGEF35A5YM69 484 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 SRRM3A6NNA2 597 aaPredicted RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 OPLAHO14841 1288 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 EXOC3O60645 756 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 PSMD10O75832 226 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 SLITRK3O94933 977 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 BCRP11274 1271 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 TNFAIP3P21580 790 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 LSP1P33241 339 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 HSD17B3P37058 310 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 KCNA1Q09470 495 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 DRAP1Q14919 205 aaPredicted RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 PTPROQ16827 1216 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 ZC2HC1CQ53FD0 456 aaPredicted RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 CC2D2BQ6DHV5 1058 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 GJB7Q6PEY0 223 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 POTEAQ6S8J7 498 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 NT5DC3Q86UY8 548 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 GLYCTKQ8IVS8 523 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 UBLCP1Q8WVY7 318 aaPredicted RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 PIK3R5Q8WYR1 880 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 VTI1AQ96AJ9 217 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 BORCS6Q96GS4 357 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 HES6Q96HZ4 224 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 ZNF577Q9BSK1 485 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 INTS2Q9H0H0 1204 aaKnown RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 DDX47Q9H0S4 455 aaKnown RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 EFCC1Q9HA90 598 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 AGPAT3Q9NRZ7 376 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 SEPT11Q9NVA2 429 aaKnown RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 APEX2Q9UBZ4 518 aa7.59□□□□□ -1.19
TDP1-213ENST00000555880 TTC7AQ9ULT0 858 aaPredicted RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 MRPL11Q9Y3B7 192 aaKnown RBP7.59□□□□□ -1.19
TDP1-213ENST00000555880 SCN9AQ15858 1988 aa7.59□□□□□ -1.2
TDP1-213ENST00000555880 ANKRD65E5RJM6 399 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 FGGP02679 453 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 ABCB4P21439 1286 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 INPP5BP32019 993 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 HPDP32754 393 aaPredicted RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 MDH1P40925 334 aaKnown RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 ZNF131P52739 623 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 GUCY1A3Q02108 690 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 ALCAMQ13740 583 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 TNIP1Q15025 636 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 TRADDQ15628 312 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 CEP55Q53EZ4 464 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 ODF2Q5BJF6 829 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 ZNF720Q7Z2F6 126 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 MICALL1Q8N3F8 863 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 SLC30A5Q8TAD4 765 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 SLC35G2Q8TBE7 412 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 NEK9Q8TD19 979 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 CHURC1Q8WUH1 139 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 RNPC3Q96LT9 517 aaKnown RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 CAMKK2Q96RR4 588 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 WDR18Q9BV38 432 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 TEKT3Q9BXF9 490 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 CARD9Q9H257 536 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 RABEP2Q9H5N1 569 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 TDRD3Q9H7E2 651 aaKnown RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.58□□□□□ -1.2
TDP1-213ENST00000555880 TMBIM4Q9HC24 238 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 POLD4Q9HCU8 107 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 SEPT9Q9UHD8 586 aaPredicted RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 AMACRQ9UHK6 382 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 RASAL2Q9UJF2 1139 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 AJAP1Q9UKB5 411 aaPredicted RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 STXBP5LQ9Y2K9 1186 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 PCDHAC2Q9Y5I4 1007 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 RBBP6Q7Z6E9 1792 aaKnown RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 ANKRD62A6NC57 917 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 TTI1O43156 1089 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 DAPK3O43293 454 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 BUB1BO60566 1050 aaPredicted RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 CPP00450 1065 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 TAL1P17542 331 aaPredicted RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 GUCY2CP25092 1073 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 IFFO1Q0D2I5 559 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 BFSP1Q12934 665 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 ITGB3BPQ13352 177 aaPredicted RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 PRPF4BQ13523 1007 aaKnown RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 MYBPC2Q14324 1141 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 PTGISQ16647 500 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 CCDC174Q6PII3 467 aa7.58□□□□□ -1.2
TDP1-213ENST00000555880 INTS8Q75QN2 995 aaKnown RBP7.58□□□□□ -1.2
TDP1-213ENST00000555880 SLC9A9Q8IVB4 645 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms