RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	WDR46	O15213	610 aa	Known RBP	5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	FOXP2	O15409	715 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	SGSM2	O43147	1006 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	ORC4	O43929	436 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	CNMD	O75829	334 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	NDUFB10	O96000	172 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	TOP1	P11387	765 aa	Known RBP	5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	SLC16A2	P36021	539 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	SLC1A4	P43007	532 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	FGD1	P98174	961 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	MAP7	Q14244	749 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	TTLL4	Q14679	1199 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	CLUL1	Q15846	466 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	BMP2KL	Q5H9B9	411 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	RCSD1	Q6JBY9	416 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	PDE12	Q6L8Q7	609 aa	Known RBP	5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	DYM	Q7RTS9	669 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	BMP8A	Q7Z5Y6	402 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	RNF180	Q86T96	592 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	DPP9	Q86TI2	863 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	TBC1D10C	Q8IV04	446 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	ADHFE1	Q8IWW8	467 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	KIAA2013	Q8IYS2	634 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	NCOA7	Q8NI08	942 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	CHURC1	Q8WUH1	139 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	PIBF1	Q8WXW3	757 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	BSND	Q8WZ55	320 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	EZH1	Q92800	747 aa	Predicted RBP	5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	NKD2	Q969F2	451 aa	Predicted RBP	5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	ATG4C	Q96DT6	458 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	OSMR	Q99650	979 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	UPF3B	Q9BZI7	483 aa	Known RBP	5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	IL25	Q9H293	177 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	CNNM2	Q9H8M5	875 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	IL17RB	Q9NRM6	502 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	ANAPC4	Q9UJX5	808 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	ACTL7B	Q9Y614	415 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	DOCK5	Q9H7D0	1870 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	CEP250	Q9BV73	2442 aa		5.42	□□□□□ -1.54
ATXN3-231	ENST00000554994	DNAH14	Q0VDD8	3507 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	FLNB	O75369	2602 aa	Known RBP	5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	LCHN	A4D1U4	455 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	MYADML2	A6NDP7	307 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994		E7EWF7	191 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	RBAK-RBAKDN	I3L0D1	243 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	PDGFB	P01127	241 aa	Predicted RBP	5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	IGHA2	P01877	340 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	CYP21A2	P08686	494 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	HOXC6	P09630	235 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	GOLGA8H	P0CJ92	632 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	RARB	P10826	455 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	ADH5	P11766	374 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	AVPR2	P30518	371 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	STAT3	P40763	770 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	NBL1	P41271	181 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	ACLY	P53396	1101 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	GRB14	Q14449	540 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	CCDC178	Q5BJE1	867 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	IFIT1B	Q5T764	474 aa	Known RBP	5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	TTBK2	Q6IQ55	1244 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	CYB5R4	Q7L1T6	521 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	VN1R5	Q7Z5H4	357 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	ATG4D	Q86TL0	474 aa	Predicted RBP	5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	ATCAY	Q86WG3	371 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	PRPF38A	Q8NAV1	312 aa	Known RBP	5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	NUP133	Q8WUM0	1156 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	STAG1	Q8WVM7	1258 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	MAP4K1	Q92918	833 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	MKL1	Q969V6	931 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	DDX11	Q96FC9	970 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	SCLY	Q96I15	445 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	SLF1	Q9BQI6	1058 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	TMEM47	Q9BQJ4	181 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	UBA5	Q9GZZ9	404 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	IRF2BPL	Q9H1B7	796 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	RAVER2	Q9HCJ3	691 aa	Known RBP	5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	HOMER2	Q9NSB8	354 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	BTBD7	Q9P203	1132 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	STIM2	Q9P246	746 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	FEM1B	Q9UK73	627 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	RABGAP1	Q9Y3P9	1069 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	ZFYVE26	Q68DK2	2539 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	NEDD4	P46934	1319 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	RAD50	Q92878	1312 aa		5.41	□□□□□ -1.54
ATXN3-231	ENST00000554994	ZNF292	O60281	2723 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994		A6NHS1	94 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	CCDC69	A6NI79	296 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	VWA5A	O00534	786 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	SLC27A2	O14975	620 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	RNASE1	P07998	156 aa	Known RBP	5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	PC	P11498	1178 aa	Known RBP	5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	FCER1A	P12319	257 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	ALAS1	P13196	640 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	ERCC3	P19447	782 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	ADORA2A	P29274	412 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	STAT2	P52630	851 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	WTAP	Q15007	396 aa		5.4	□□□□□ -1.54
ATXN3-231	ENST00000554994	SART3	Q15020	963 aa	Known RBP	5.4	□□□□□ -1.54

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