RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LINC01465Q8N7H1 131 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 C2orf69Q8N8R5 385 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 SYT11Q9BT88 431 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 POLR3FQ9H1D9 316 aaPredicted RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 ZCCHC17Q9NP64 241 aaKnown RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 HSPBP1Q9NZL4 362 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 MYO6Q9UM54 1294 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 ACTN1P12814 892 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 RFC5P40937 340 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 MORN1Q5T089 497 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 IRF2BP2Q7Z5L9 587 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 GPR142Q7Z601 462 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 NEK11Q8NG66 645 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 SEPT1Q8WYJ6 367 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 ATP8B3O60423 1300 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 SSU72P8A0A1W2PR75 194 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 ASB14A6NK59 587 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 IGF2BP3O00425 579 aaKnown RBP eCLIP9.73□□□□□ -0.85
TDP1-210ENST00000554976 SCP2P22307 547 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 CLDN10P78369 228 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 DMP1Q13316 513 aaPredicted RBP9.73□□□□□ -0.85
TDP1-210ENST00000554976 PLCB4Q15147 1175 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 EPC2Q52LR7 807 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 CDCA2Q69YH5 1023 aaPredicted RBP9.73□□□□□ -0.85
TDP1-210ENST00000554976 USP6NLQ92738 828 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 COPS5Q92905 334 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 MFSD14AQ96MC6 490 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 MMRN2Q9H8L6 949 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 UQCRHLA0A096LP55 91 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 PES1O00541 588 aaKnown RBP9.73□□□□□ -0.85
TDP1-210ENST00000554976 STRNO43815 780 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 FAM189A1O60320 539 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 UQCRHP07919 91 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 UCHL3P15374 230 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 PRKCIP41743 596 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 NAMPTP43490 491 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 SP4Q02446 784 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 IRX2Q9BZI1 471 aaPredicted RBP9.73□□□□□ -0.85
TDP1-210ENST00000554976 VTA1Q9NP79 307 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 PRDM10Q9NQV6 1147 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 FHOD1Q9Y613 1164 aa9.73□□□□□ -0.85
TDP1-210ENST00000554976 DENND3A2RUS2 1198 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 PJA2O43164 708 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 ADCY6O43306 1168 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CYP2J2P51589 502 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 STAT5BP51692 787 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 PPP3CAQ08209 521 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 MTERF2Q49AM1 385 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 DNTTIP2Q5QJE6 756 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 EEPD1Q7L9B9 569 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 HS2ST1Q7LGA3 356 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 PARK7Q99497 189 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 MPHOSPH6Q99547 160 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 KMT5AQ9NQR1 393 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 TRIM10Q9UDY6 481 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 DAAM1Q9Y4D1 1078 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CASP8AP2Q9UKL3 1982 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 ABLIM1O14639 778 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CCNA1P78396 465 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 DRP2Q13474 957 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CAPSQ13938 189 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 FAM160B1Q5W0V3 765 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CHADLQ6NUI6 762 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 RRAGAQ7L523 313 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 ZNF397Q8NF99 534 aaPredicted RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 KIF18AQ8NI77 898 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 NPLOC4Q8TAT6 608 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 MAML3Q96JK9 1138 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CRACR2AQ9BSW2 395 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 TMEM134Q9H6X4 195 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 TFR2Q9UP52 801 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 THSD7BQ9C0I4 1608 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 DOCK3Q8IZD9 2030 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 P4HA2O15460 535 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 GARTP22102 1010 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CNGA1P29973 690 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 EIF4A3P38919 411 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 POLR2FP61218 127 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 EXOC3L4Q17RC7 722 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 IQCEQ6IPM2 695 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 CRELD2Q6UXH1 353 aaPredicted RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 C15orf39Q6ZRI6 1047 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 INTS8Q75QN2 995 aaKnown RBP9.72□□□□□ -0.85
TDP1-210ENST00000554976 XXYLT1Q8NBI6 393 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 LRRN4CLQ8ND94 238 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 ATP8B4Q8TF62 1192 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 LACRTQ9GZZ8 138 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 GCNT4Q9P109 453 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 COQ4Q9Y3A0 265 aa9.72□□□□□ -0.85
TDP1-210ENST00000554976 EVPLQ92817 2033 aa9.71□□□□□ -0.85
TDP1-210ENST00000554976 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.71□□□□□ -0.85
TDP1-210ENST00000554976 SERPING1P05155 500 aa9.71□□□□□ -0.85
TDP1-210ENST00000554976 SLC10A3P09131 477 aa9.71□□□□□ -0.85
TDP1-210ENST00000554976 ABCD1P33897 745 aa9.71□□□□□ -0.85
TDP1-210ENST00000554976 KIF11P52732 1056 aa9.71□□□□□ -0.85
TDP1-210ENST00000554976 WNT7BP56706 349 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms