RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CCDC194A0A1B0GVG4 234 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-216ENST00000554975 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 CYTH3O43739 400 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-216ENST00000554975 SKILP12757 684 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 ARHGAP4P98171 946 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 MORC3Q14149 939 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 PGM5Q15124 567 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 SYCP1Q15431 976 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 TPD52L1Q16890 204 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-216ENST00000554975 SLC35G1Q2M3R5 365 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 LONRF3Q496Y0 759 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 TMC6Q7Z403 805 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 FILIP1Q7Z7B0 1213 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 RTN4RL1Q86UN2 441 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-216ENST00000554975 VSIG10LQ86VR7 867 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 BLIDQ8IZY5 108 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
SHMT2-216ENST00000554975 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 SRBD1Q8N5C6 995 aaKnown RBP12.35□□□□□ -0.43
SHMT2-216ENST00000554975 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 MAN1B1Q9UKM7 699 aa12.35□□□□□ -0.43
SHMT2-216ENST00000554975 ATF7P17544 494 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-216ENST00000554975 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-216ENST00000554975 PRPHP41219 470 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 SARSP49591 514 aaKnown RBP12.34□□□□□ -0.43
SHMT2-216ENST00000554975 UBASH3AP57075 661 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 CCZ1BP86790 482 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 CCZ1P86791 482 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-216ENST00000554975 SPAG1Q07617 926 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 PPP1R18Q6NYC8 613 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 KRT25Q7Z3Z0 450 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 ADSSL1Q8N142 457 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 ANKRD20A12PQ8NF67 263 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 SPATA20Q8TB22 786 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 PPP2R3CQ969Q6 453 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 APOL5Q9BWW9 433 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 MAF1Q9H063 256 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 S1PR5Q9H228 398 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 AGO3Q9H9G7 860 aaKnown RBP12.34□□□□□ -0.43
SHMT2-216ENST00000554975 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
SHMT2-216ENST00000554975 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 GCOM1H8Y6P7 765 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-216ENST00000554975 POLR2MP0CAP2 368 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 TNNT1P13805 278 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 GNA11P29992 359 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 PPP1R2P41236 205 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 GHRHRQ02643 423 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 LRMPQ12912 555 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 HSP90AA2PQ14568 343 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-216ENST00000554975 FBXO47Q5MNV8 452 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 CMTR2Q8IYT2 770 aaKnown RBP12.33□□□□□ -0.44
SHMT2-216ENST00000554975 KREMEN2Q8NCW0 462 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 CCDC47Q96A33 483 aaKnown RBP12.33□□□□□ -0.44
SHMT2-216ENST00000554975 ZBTB10Q96DT7 871 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 GPR20Q99678 358 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 TLE6Q9H808 572 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 OTOGLQ3ZCN5 2332 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 CACNA1GO43497 2377 aa12.33□□□□□ -0.44
SHMT2-216ENST00000554975 FRYLO94915 3013 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 EVPLQ92817 2033 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-216ENST00000554975 hCG_1642624A0A1W2PR95 340 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 KRT37O76014 449 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 CD52P31358 61 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 NUBP1P53384 320 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 ERVFC1P60507 584 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 KCNC3Q14003 757 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 NPY5RQ15761 445 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 DUSP6Q16828 381 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 FILIP1LQ4L180 1135 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 UTP14CQ5TAP6 766 aaKnown RBP12.32□□□□□ -0.44
SHMT2-216ENST00000554975 SYCE2Q6PIF2 218 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 KCNV1Q6PIU1 500 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 CYFIP1Q7L576 1253 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-216ENST00000554975 CUL5Q93034 780 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 NKD2Q969F2 451 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-216ENST00000554975 DHX58Q96C10 678 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 AK8Q96MA6 479 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 C16orf45Q96MC5 204 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-216ENST00000554975 PDCL3Q9H2J4 239 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 BARHL2Q9NY43 387 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 CDY2AQ9Y6F7 541 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 ACACBO00763 2458 aa12.32□□□□□ -0.44
SHMT2-216ENST00000554975 FANCMQ8IYD8 2048 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms