RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 MRE11P49959 708 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 GATMP50440 423 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 UBE3AQ05086 875 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 GNL2Q13823 731 aaKnown RBP11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 EMC2Q15006 297 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 PCBP1Q15365 356 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 XKR9Q5GH70 373 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 SRGAP1Q7Z6B7 1085 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 ZNF598Q86UK7 904 aaKnown RBP11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 ECHDC2Q86YB7 292 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 TPH2Q8IWU9 490 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 PRPF31Q8WWY3 499 aaKnown RBP11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 ZNF668Q96K58 619 aaPredicted RBP11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 NLRP4Q96MN2 994 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 TBC1D32Q96NH3 1257 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 MTRQ99707 1265 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 TMEM60Q9H2L4 133 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 IFT122Q9HBG6 1241 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 TUFT1Q9NNX1 390 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 NOL7Q9UMY1 257 aaKnown RBP11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 PCDHB12Q9Y5F1 795 aa11.61□□□□□ -0.55
PTCD2P1-201ENST00000554393 POTEMA6NI47 508 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 DGAT1O75907 488 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 ITGB1P05556 798 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 OR52Z1P0C646 297 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 FGFR1P11362 822 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 LAG3P18627 525 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 RARRES1P49788 294 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 RAB27AP51159 221 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 POU5F1BQ06416 359 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 MXD4Q14582 209 aaPredicted RBP11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 TCEAL5Q5H9L2 206 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 TTC38Q5R3I4 469 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 FAM102BQ5T8I3 360 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 KSR1Q8IVT5 923 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 ABI1Q8IZP0 508 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 LRRC43Q8N309 656 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 KLHL23Q8NBE8 558 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 SPPL3Q8TCT6 385 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 PPP2R3CQ969Q6 453 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 TMEM143Q96AN5 459 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 PABPC5Q96DU9 382 aaKnown RBP11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 TMX3Q96JJ7 454 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 AGPAT5Q9NUQ2 364 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
PTCD2P1-201ENST00000554393 CARNS1A5YM72 827 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 ZNF623O75123 536 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 SPATA31C1P0DKV0 1188 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 ATF7P17544 494 aaPredicted RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 IBSPP21815 317 aaPredicted RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 MUTP22033 750 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 FGFR4P22455 802 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 PPM1AP35813 382 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 PHKA2P46019 1235 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 KCNQ1P51787 676 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 FOXK1P85037 733 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 CAMK1Q14012 370 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 LEXMQ3ZCV2 418 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 SPOUT1Q5T280 376 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 TWF2Q6IBS0 349 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 CATSPER4Q7RTX7 472 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 COLGALT1Q8NBJ5 622 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 ERMNQ8TAM6 284 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 DDX27Q96GQ7 796 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 CASD1Q96PB1 797 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 POLR3CQ9BUI4 534 aaPredicted RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 MRPL9Q9BYD2 267 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 NFKBIZQ9BYH8 718 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 CWH43Q9H720 699 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 ALG13Q9NP73 1137 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 XPNPEP1Q9NQW7 623 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 TYW1Q9NV66 732 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 PIN4Q9Y237 131 aaKnown RBP11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 LZTS1Q9Y250 596 aa11.59□□□□□ -0.55
PTCD2P1-201ENST00000554393 FSD2A1L4K1 749 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 LAD1O00515 517 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 ZBTB39O15060 712 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 CSDE1O75534 798 aaKnown RBP11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 SRGAP2CP0DJJ0 459 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 KCNA5P22460 613 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 DNAJB1P25685 340 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 RPA1P27694 616 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 TFDP1Q14186 410 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 ZNF174Q15697 407 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 CTC1Q2NKJ3 1217 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 CLLU1OSQ5K130 101 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 HAUS3Q68CZ6 603 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 PDE12Q6L8Q7 609 aaKnown RBP11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 CATSPER3Q86XQ3 398 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 RNF149Q8NC42 400 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 POF1BQ8WVV4 589 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 NACC1Q96RE7 527 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 FAM105AQ9NUU6 356 aa11.58□□□□□ -0.56
PTCD2P1-201ENST00000554393 TDRD15B5MCY1 1934 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms