RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 STK25O00506 426 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 PSAPP07602 524 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 EPCAMP16422 314 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 NPR3P17342 541 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 USP11P51784 963 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 AK2P54819 239 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 NLRP5P59047 1200 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 SETQ01105 290 aaPredicted RBP13.3□□□□□ -0.28
SRP54-203ENST00000553544 ZNF746Q6NUN9 644 aaPredicted RBP13.3□□□□□ -0.28
SRP54-203ENST00000553544 TMC5Q6UXY8 1006 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 DDX53Q86TM3 631 aaKnown RBP13.3□□□□□ -0.28
SRP54-203ENST00000553544 CCDC105Q8IYK2 499 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 DAGLBQ8NCG7 672 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 HELQQ8TDG4 1101 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 SLC22A17Q8WUG5 538 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 RSPH1Q8WYR4 309 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 AIFM3Q96NN9 605 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 NRBP2Q9NSY0 501 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
SRP54-203ENST00000553544 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 LMNAP02545 664 aaKnown RBP13.29□□□□□ -0.28
SRP54-203ENST00000553544 CTSAP10619 480 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 CLCN3P51790 818 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 PRR16Q569H4 304 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 CWF19L1Q69YN2 538 aaKnown RBP13.29□□□□□ -0.28
SRP54-203ENST00000553544 GALNT17Q6IS24 598 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 GPR149Q86SP6 731 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 ZNF598Q86UK7 904 aaKnown RBP13.29□□□□□ -0.28
SRP54-203ENST00000553544 SMAP1Q8IYB5 467 aaPredicted RBP13.29□□□□□ -0.28
SRP54-203ENST00000553544 FAM167AQ96KS9 214 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 ZNF577Q9BSK1 485 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 ZBP1Q9H171 429 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 SLKQ9H2G2 1235 aaPredicted RBP13.29□□□□□ -0.28
SRP54-203ENST00000553544 KCNK12Q9HB15 430 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 CHST12Q9NRB3 414 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 TCEAL9Q9UHQ7 104 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
SRP54-203ENST00000553544 CYP3A7-CYP3A51PA0A087WV96 503 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 CDKL5O76039 1030 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 DARSP14868 501 aaKnown RBP13.28□□□□□ -0.28
SRP54-203ENST00000553544 CYP3A7P24462 503 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 CCDC149Q6ZUS6 474 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 SIX5Q8N196 739 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 LRRC71Q8N4P6 559 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 TBCKQ8TEA7 893 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 AUTS2Q8WXX7 1259 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 IGSF21Q96ID5 467 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 SCLT1Q96NL6 688 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 SFXN1Q9H9B4 322 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 GABBR1Q9UBS5 961 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 DUSP12Q9UNI6 340 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
SRP54-203ENST00000553544 MSH4O15457 936 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 ZC3H11AO75152 810 aaKnown RBP eCLIP13.27□□□□□ -0.29
SRP54-203ENST00000553544 SKIP12755 728 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 KLRC2P26717 231 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 GPC3P51654 580 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.29
SRP54-203ENST00000553544 ME3Q16798 604 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 LETM2Q2VYF4 491 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 DGLUCYQ7Z3D6 616 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 LINC01465Q8N7H1 131 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 NLRP7Q8WX94 980 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 ZNF668Q96K58 619 aaPredicted RBP13.27□□□□□ -0.29
SRP54-203ENST00000553544 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 EMILIN2Q9BXX0 1053 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 WNT16Q9UBV4 365 aa13.27□□□□□ -0.29
SRP54-203ENST00000553544 LARGE1O95461 756 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 GALTP07902 379 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 FDPSP14324 419 aaKnown RBP13.26□□□□□ -0.29
SRP54-203ENST00000553544 FGFR4P22455 802 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 KCNA4P22459 653 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 RFX1P22670 979 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 PHKA2P46019 1235 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 RNASELQ05823 741 aaKnown RBP13.26□□□□□ -0.29
SRP54-203ENST00000553544 Q4G0T1 1027 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 MOXD1Q6UVY6 613 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 GLB1LQ6UWU2 654 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 C15orf39Q6ZRI6 1047 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 RIT2Q99578 217 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 TRAIPQ9BWF2 469 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 GCOM2Q9BZD3 368 aaPredicted RBP13.26□□□□□ -0.29
SRP54-203ENST00000553544 KCNJ14Q9UNX9 436 aa13.26□□□□□ -0.29
SRP54-203ENST00000553544 FRYLO94915 3013 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 DTNBO60941 627 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 ALDH2P05091 517 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 NEK4P51957 841 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 NOMO2Q5JPE7 1267 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 B3GNT9Q6UX72 402 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 TMEM173Q86WV6 379 aaPredicted RBP13.25□□□□□ -0.29
SRP54-203ENST00000553544 KIAA2013Q8IYS2 634 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms