RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SPATA31A5Q5VU36 1347 aa6.64□□□□□ -1.35
CHMP4A-210ENST00000552620 SPATA31A7Q8IWB4 1347 aa6.64□□□□□ -1.35
CHMP4A-210ENST00000552620 ROBO3Q96MS0 1386 aa6.64□□□□□ -1.35
CHMP4A-210ENST00000552620 ZNF831Q5JPB2 1677 aa6.64□□□□□ -1.35
CHMP4A-210ENST00000552620 STRCQ7RTU9 1775 aa6.64□□□□□ -1.35
CHMP4A-210ENST00000552620 PVALEFA0A1B0GWK0 134 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 ESYT2A0FGR8 921 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 ANO9A1A5B4 782 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 hCG_1984214I3L0E3 225 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 NMT2O60551 498 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 USO1O60763 962 aaKnown RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 RPS6KA4O75676 772 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 OR52Z1P0C646 297 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 CYP2D6P10635 497 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 BCRP11274 1271 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 PRLRP16471 622 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 MAOBP27338 520 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 HNRNPH3P31942 346 aaKnown RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 USP14P54578 494 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 HNRNPH2P55795 449 aaKnown RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 SUZ12Q15022 739 aaKnown RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 NONOQ15233 471 aaKnown RBP eCLIP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 HSP90B2PQ58FF3 399 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 FKBP15Q5T1M5 1219 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 TBC1D9BQ66K14 1250 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 HGSNATQ68CP4 663 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 CCDC70Q6NSX1 233 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 CSGALNACT2Q8N6G5 542 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 ZNF713Q8N859 430 aaPredicted RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 RASSF8Q8NHQ8 419 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 NEDD1Q8NHV4 660 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 GPBAR1Q8TDU6 330 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 DOT1LQ8TEK3 1739 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 P2RX5Q93086 422 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 SHDQ96IW2 340 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 BTBD6Q96KE9 485 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 ERGIC2Q96RQ1 377 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 CHP1Q99653 195 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 WNK3Q9BYP7 1800 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 ZC3H12CQ9C0D7 883 aaKnown RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 TMEM60Q9H2L4 133 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 IL17RBQ9NRM6 502 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 TFCP2L1Q9NZI6 479 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 SIRPGQ9P1W8 387 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 ADAM21Q9UKJ8 722 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 REXO2Q9Y3B8 237 aaKnown RBP6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 SAR1BQ9Y6B6 198 aa6.63□□□□□ -1.35
CHMP4A-210ENST00000552620 MYH14Q7Z406 1995 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 BAZ2AQ9UIF9 1905 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 FAM205AQ6ZU69 1335 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 IRS2Q9Y4H2 1338 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 ERICH4A6NGS2 130 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 KLRF2D3W0D1 207 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 SLC26A4O43511 780 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 RPS6KA5O75582 802 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 IVLP07476 585 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 VEGFAP15692 232 aaPredicted RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 PRDX5P30044 214 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 TM4SF1P30408 202 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 MTIF2P46199 727 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 GIPRP48546 466 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 NOVP48745 357 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 AARSP49588 968 aaKnown RBP eCLIP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 ITIH3Q06033 890 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 KIF5AQ12840 1032 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 PDIA5Q14554 519 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 CASP8Q14790 479 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 SPA17Q15506 151 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 INF2Q27J81 1249 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 CCDC122Q5T0U0 273 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 NEK8Q86SG6 692 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 KIAA1328Q86T90 577 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 NBPF5PQ86XG9 351 aaPredicted RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 MKL1Q969V6 931 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 JAKMIP2Q96AA8 810 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 RRP36Q96EU6 259 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 CALML4Q96GE6 196 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 PNKPQ96T60 521 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 TMEM47Q9BQJ4 181 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 RAB34Q9BZG1 259 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 TRIM9Q9C026 710 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 TTYH3Q9C0H2 523 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 NRSN2Q9GZP1 204 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 PDE11AQ9HCR9 933 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 ZCCHC17Q9NP64 241 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 CACNA2D2Q9NY47 1150 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 ZNRF3Q9ULT6 936 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 GUCA1BQ9UMX6 200 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 SNCAIPQ9Y6H5 919 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 A0A1B0GUL6 1792 aa6.62□□□□□ -1.35
CHMP4A-210ENST00000552620 AHDC1Q5TGY3 1603 aaPredicted RBP6.61□□□□□ -1.35
CHMP4A-210ENST00000552620 A0A0U1RQJ8 604 aa6.61□□□□□ -1.35
CHMP4A-210ENST00000552620 TRIM49BA6NDI0 452 aa6.61□□□□□ -1.35
CHMP4A-210ENST00000552620 SMCO2A6NFE2 343 aa6.61□□□□□ -1.35
CHMP4A-210ENST00000552620 WTIPA6NIX2 430 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms