RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 PTGISQ16647 500 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 KNOP1Q1ED39 458 aaKnown RBP10.55□□□□□ -0.72
LIMA1-211ENST00000552338 EDRF1Q3B7T1 1238 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 RUFY4Q6ZNE9 571 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 TAS1R3Q7RTX0 852 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 RSPH3Q86UC2 560 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 SLC9A9Q8IVB4 645 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 MYOCDQ8IZQ8 938 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 CAGE1Q8TC20 777 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
LIMA1-211ENST00000552338 MED15Q96RN5 788 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 FGFBP2Q9BYJ0 223 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
LIMA1-211ENST00000552338 MRPL44Q9H9J2 332 aaKnown RBP10.55□□□□□ -0.72
LIMA1-211ENST00000552338 SUGCTQ9HAC7 445 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 SLC39A2Q9NP94 309 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 KMT5AQ9NQR1 393 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 RWDD2AQ9UIY3 292 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 TBX20Q9UMR3 447 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 BRCA2P51587 3418 aa10.55□□□□□ -0.72
LIMA1-211ENST00000552338 ALPK3Q96L96 1907 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 K7ERI5 159 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 BIN1O00499 593 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 PSMA7O14818 248 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 TGFB1I1O43294 461 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 B4GALT4O60513 344 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 PARNO95453 639 aaKnown RBP10.54□□□□□ -0.72
LIMA1-211ENST00000552338 MYBP10242 640 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 NMT1P30419 496 aaKnown RBP10.54□□□□□ -0.72
LIMA1-211ENST00000552338 POU5F1Q01860 360 aaKnown RBP10.54□□□□□ -0.72
LIMA1-211ENST00000552338 LRRC63Q05C16 580 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 STIM1Q13586 685 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 AMHR2Q16671 573 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 TTI2Q6NXR4 508 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 TRAF7Q6Q0C0 670 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 ZPBP2Q6X784 338 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 RHPN2Q8IUC4 686 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 METTL13Q8N6R0 699 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 USP38Q8NB14 1042 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 RNF149Q8NC42 400 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 GLIS3Q8NEA6 775 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 DNAJB3Q8WWF6 145 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 CELF4Q9BZC1 486 aaKnown RBP10.54□□□□□ -0.72
LIMA1-211ENST00000552338 TANC1Q9C0D5 1861 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 NAT10Q9H0A0 1025 aaKnown RBP10.54□□□□□ -0.72
LIMA1-211ENST00000552338 POLD4Q9HCU8 107 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 TYW1Q9NV66 732 aaKnown RBP10.54□□□□□ -0.72
LIMA1-211ENST00000552338 DMAC2Q9NW81 257 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 EXOC7Q9UPT5 735 aa10.54□□□□□ -0.72
LIMA1-211ENST00000552338 ZMYM2Q9UBW7 1377 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 A0A087WZ62 844 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 BICDL2A1A5D9 508 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 K7ENM7 598 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ACKR2O00590 384 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 KIAA0391O15091 583 aaKnown RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 SLC16A4O15374 487 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 GCNT3O95395 438 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 DARSP14868 501 aaKnown RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 PROZP22891 400 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 EIF4BP23588 611 aaKnown RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 AXLP30530 894 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 PHKA2P46019 1235 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ZNF165P49910 485 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 NLRP11P59045 1033 aaKnown RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 MRPS6P82932 125 aaKnown RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 MBTD1Q05BQ5 628 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ENPEPQ07075 957 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 PAK1Q13153 545 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 NCAPHQ15003 741 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ANO6Q4KMQ2 910 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 C11orf57Q6ZUT1 292 aaPredicted RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 NECAB2Q7Z6G3 386 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ZBTB8OSQ8IWT0 167 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 DEPTORQ8TB45 409 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 GOLGA5Q8TBA6 731 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 FAM200AQ8TCP9 573 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 P2RX5Q93086 422 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 WNT8BQ93098 351 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 HPS3Q969F9 1004 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ZBTB10Q96DT7 871 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 ACCSQ96QU6 501 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 FDXACB1Q9BRP7 624 aaPredicted RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 SENP6Q9GZR1 1112 aaPredicted RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 SEMA6BQ9H3T3 888 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 TSPY26PQ9H489 355 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 C11orf49Q9H6J7 331 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 PRMT7Q9NVM4 692 aaPredicted RBP10.53□□□□□ -0.72
LIMA1-211ENST00000552338 AKT3Q9Y243 479 aa10.53□□□□□ -0.72
LIMA1-211ENST00000552338 DENND3A2RUS2 1198 aa10.52□□□□□ -0.73
LIMA1-211ENST00000552338 LRRC10BA6NIK2 292 aa10.52□□□□□ -0.73
LIMA1-211ENST00000552338 CCDC169A6NNP5 214 aa10.52□□□□□ -0.73
LIMA1-211ENST00000552338 SMTNL1A8MU46 457 aa10.52□□□□□ -0.73
LIMA1-211ENST00000552338 ABLIM1O14639 778 aa10.52□□□□□ -0.73
LIMA1-211ENST00000552338 MAPK13O15264 365 aa10.52□□□□□ -0.73
LIMA1-211ENST00000552338 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms