RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SUPT20HL1Q3ZLR7 823 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 VPS53Q5VIR6 699 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 CRTC3Q6UUV7 619 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 ATG14Q6ZNE5 492 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 CCDC129Q6ZRS4 1044 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 KRT26Q7Z3Y9 468 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 FOXP4Q8IVH2 680 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-213ENST00000550629 MAPKAPK5Q8IW41 473 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 IFNL3Q8IZI9 196 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 TGFBRAP1Q8WUH2 860 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 SHISA4Q96DD7 197 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 HHIPL1Q96JK4 782 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 LSG1Q9H089 658 aaKnown RBP6.78□□□□□ -1.32
SCAF11-213ENST00000550629 NAPBQ9H115 298 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 IL25Q9H293 177 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 VEZTQ9HBM0 779 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 ZNF287Q9HBT7 754 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 CD320Q9NPF0 282 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 DDX4Q9NQI0 724 aaKnown RBP6.78□□□□□ -1.32
SCAF11-213ENST00000550629 MCM9Q9NXL9 1143 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 PI4KBQ9UBF8 816 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 HERC5Q9UII4 1024 aaKnown RBP6.78□□□□□ -1.32
SCAF11-213ENST00000550629 ANAPC4Q9UJX5 808 aa6.78□□□□□ -1.32
SCAF11-213ENST00000550629 DDX60LQ5H9U9 1706 aaKnown RBP6.78□□□□□ -1.32
SCAF11-213ENST00000550629 NCANO14594 1321 aa6.77□□□□□ -1.32
SCAF11-213ENST00000550629 ASTN2O75129 1339 aaPredicted RBP6.77□□□□□ -1.32
SCAF11-213ENST00000550629 TCP10L2B9ZVM9 353 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF205O95201 554 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 VAV1P15498 845 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 BMP8BP34820 402 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 CACNB3P54284 484 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 PICALMQ13492 652 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 SNX17Q15036 470 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 IMMTQ16891 758 aaKnown RBP6.77□□□□□ -1.33
SCAF11-213ENST00000550629 C12orf60Q5U649 245 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 CTR9Q6PD62 1173 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 TTLL10Q6ZVT0 673 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF526Q8TF50 670 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-213ENST00000550629 SDR42E1Q8WUS8 393 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 TEPSINQ96N21 525 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 RNF41Q9H4P4 317 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-213ENST00000550629 UPF2Q9HAU5 1272 aaKnown RBP6.77□□□□□ -1.33
SCAF11-213ENST00000550629 CWC22Q9HCG8 908 aaKnown RBP6.77□□□□□ -1.33
SCAF11-213ENST00000550629 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 EPB41L4AQ9HCS5 686 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-213ENST00000550629 SWAP70Q9UH65 585 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 SERPINB13Q9UIV8 391 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 INPP5FQ9Y2H2 1132 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 YBX2Q9Y2T7 364 aaKnown RBP6.77□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF451Q9Y4E5 1061 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 FOCADQ5VW36 1801 aa6.77□□□□□ -1.33
SCAF11-213ENST00000550629 A0A1W2PQH9 124 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 B8ZZF3 427 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF213O14771 459 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 TOMM70O94826 608 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 GSNP06396 782 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 FGRP09769 529 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 ZKSCAN1P17029 563 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 CD247P20963 164 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 MCCP23508 829 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 HSPA4P34932 840 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 NF2P35240 595 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 KIR2DL2P43627 348 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 ZNF445P59923 1031 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 ANAPC15P60006 121 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 FKBP1BP68106 108 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 PTH1RQ03431 593 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 PPARAQ07869 468 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 TCP10Q12799 353 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 FSTL1Q12841 308 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 KRT32Q14532 448 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 NECTIN1Q15223 517 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 SLC14A2Q15849 920 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 NOL9Q5SY16 702 aaKnown RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 CEP128Q6ZU80 1094 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 ZFPM1Q8IX07 1006 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 SMC1BQ8NDV3 1235 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 OR6P1Q8NGX9 317 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 BRF1Q92994 677 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 IL17RAQ96F46 866 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 INTS4Q96HW7 963 aaKnown RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 SHDQ96IW2 340 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 SEC16BQ96JE7 1060 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 FCRL2Q96LA5 508 aaPredicted RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 TMEM39BQ9GZU3 492 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 CCSER2Q9H7U1 834 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 SAP30BPQ9UHR5 308 aaKnown RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 RAPGEFL1Q9UHV5 662 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 PALD1Q9ULE6 856 aa6.76□□□□□ -1.33
SCAF11-213ENST00000550629 RBM8AQ9Y5S9 174 aaKnown RBP6.76□□□□□ -1.33
SCAF11-213ENST00000550629 NAV1Q8NEY1 1877 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 DDTLA6NHG4 134 aaPredicted RBP6.75□□□□□ -1.33
SCAF11-213ENST00000550629 ADM5C9JUS6 153 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 H0Y8X5 98 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 PRRG2O14669 202 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 NRDCO43847 1150 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 ORC4O43929 436 aa6.75□□□□□ -1.33
SCAF11-213ENST00000550629 NUAK1O60285 661 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms