RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 POU5F1BQ06416 359 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 KCNA1Q09470 495 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 DNAJB3Q8WWF6 145 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 ACCSQ96QU6 501 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 KCTD10Q9H3F6 313 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 SEMA6BQ9H3T3 888 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 TMEM206Q9H813 350 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 TBX20Q9UMR3 447 aa31.65■■■□□ 2.66
BRF1-213ENST00000548421 TRIM49BA6NDI0 452 aa31.64■■■□□ 2.66
BRF1-213ENST00000548421 PMS1P54277 932 aaKnown RBP31.64■■■□□ 2.66
BRF1-213ENST00000548421 PTGISQ16647 500 aa31.64■■■□□ 2.66
BRF1-213ENST00000548421 ZBTB8OSQ8IWT0 167 aa31.64■■■□□ 2.66
BRF1-213ENST00000548421 NFKBIZQ9BYH8 718 aa31.64■■■□□ 2.66
BRF1-213ENST00000548421 ZMYM2Q9UBW7 1377 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 GOLGA6L3A6NEY3 463 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 GPC3P51654 580 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 EFNA5P52803 228 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 LRRC63Q05C16 580 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 FOXR2Q6PJQ5 311 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 SERINC5Q86VE9 423 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 ZNF410Q86VK4 478 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 MAP4K3Q8IVH8 894 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 NME8Q8N427 588 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 TSG101Q99816 390 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 TMEM134Q9H6X4 195 aa31.63■■■□□ 2.65
BRF1-213ENST00000548421 PHLPP2Q6ZVD8 1323 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 ARVCFO00192 962 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 RPLP2P05387 115 aaKnown RBP31.62■■■□□ 2.65
BRF1-213ENST00000548421 PHKA2P46019 1235 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 NLRP11P59045 1033 aaKnown RBP31.62■■■□□ 2.65
BRF1-213ENST00000548421 PTENP60484 403 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 COL13A1Q5TAT6 717 aaPredicted RBP31.62■■■□□ 2.65
BRF1-213ENST00000548421 TTI2Q6NXR4 508 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 ZNF710Q8N1W2 664 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 ANKLE1Q8NAG6 615 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 EXOC7Q9UPT5 735 aa31.62■■■□□ 2.65
BRF1-213ENST00000548421 FSD2A1L4K1 749 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 GOLGA6L19H0YKK7 550 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 K7ERI5 159 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 CAPN2P17655 700 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 MNX1P50219 401 aaPredicted RBP31.61■■■□□ 2.65
BRF1-213ENST00000548421 NCAPHQ15003 741 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 ZCWPW2Q504Y3 356 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 SPATA1Q5VX52 437 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 ANKRD40Q6AI12 368 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 PPP4R3CPQ6ZMV5 832 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 SYCP3Q8IZU3 236 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 NLRP7Q8WX94 980 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 ZNF668Q96K58 619 aaPredicted RBP31.61■■■□□ 2.65
BRF1-213ENST00000548421 PPP1R16BQ96T49 567 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 TMEM106CQ9BVX2 250 aa31.61■■■□□ 2.65
BRF1-213ENST00000548421 TYW1Q9NV66 732 aaKnown RBP31.61■■■□□ 2.65
BRF1-213ENST00000548421 A0A087WZ62 844 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 PDXKO00764 312 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 STRN3Q13033 797 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 TAS1R3Q7RTX0 852 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 RSPH3Q86UC2 560 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 IFNLR1Q8IU57 520 aaPredicted RBP31.6■■■□□ 2.65
BRF1-213ENST00000548421 SCLT1Q96NL6 688 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 CTAGE1Q96RT6 745 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 FDXACB1Q9BRP7 624 aaPredicted RBP31.6■■■□□ 2.65
BRF1-213ENST00000548421 GBP3Q9H0R5 595 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 IFT122Q9HBG6 1241 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 TRMT13Q9NUP7 481 aaKnown RBP31.6■■■□□ 2.65
BRF1-213ENST00000548421 NOD1Q9Y239 953 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 NFE2L3Q9Y4A8 694 aa31.6■■■□□ 2.65
BRF1-213ENST00000548421 TMEM62Q0P6H9 643 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 TPD52L1Q16890 204 aaPredicted RBP31.59■■■□□ 2.65
BRF1-213ENST00000548421 SENP6Q9GZR1 1112 aaPredicted RBP31.59■■■□□ 2.65
BRF1-213ENST00000548421 CCDC113Q9H0I3 377 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 TRAF3IP3Q9Y228 551 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 KIAA0100Q14667 2235 aaKnown RBP31.59■■■□□ 2.65
BRF1-213ENST00000548421 CALUO43852 315 aaPredicted RBP31.59■■■□□ 2.65
BRF1-213ENST00000548421 GPR32O75388 356 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 PTK7Q13308 1070 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 KIZQ2M2Z5 673 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 HS2ST1Q7LGA3 356 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 RPAINQ86UA6 219 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 GOLGA5Q8TBA6 731 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 ADAMTS10Q9H324 1103 aa31.59■■■□□ 2.65
BRF1-213ENST00000548421 TGFB1I1O43294 461 aa31.58■■■□□ 2.65
BRF1-213ENST00000548421 CDK7P50613 346 aa31.58■■■□□ 2.65
BRF1-213ENST00000548421 TPM4P67936 248 aa31.58■■■□□ 2.65
BRF1-213ENST00000548421 EDRF1Q3B7T1 1238 aa31.58■■■□□ 2.65
BRF1-213ENST00000548421 DUSP9Q99956 384 aaKnown RBP31.58■■■□□ 2.65
BRF1-213ENST00000548421 MBTD1Q05BQ5 628 aa31.57■■■□□ 2.64
BRF1-213ENST00000548421 MAPK6Q16659 721 aa31.57■■■□□ 2.64
BRF1-213ENST00000548421 CSGALNACT2Q8N6G5 542 aa31.57■■■□□ 2.64
BRF1-213ENST00000548421 CGNQ9P2M7 1197 aaKnown RBP31.57■■■□□ 2.64
BRF1-213ENST00000548421 INO80B-WBP1J3KQ70 363 aa31.56■■■□□ 2.64
BRF1-213ENST00000548421 B4GALT4O60513 344 aa31.56■■■□□ 2.64
BRF1-213ENST00000548421 SNRPFP62306 86 aaKnown RBP31.56■■■□□ 2.64
BRF1-213ENST00000548421 SRGAP1Q7Z6B7 1085 aa31.56■■■□□ 2.64
BRF1-213ENST00000548421 WNT8BQ93098 351 aa31.56■■■□□ 2.64
BRF1-213ENST00000548421 GCOM2Q9BZD3 368 aaPredicted RBP31.56■■■□□ 2.64
BRF1-213ENST00000548421 INO80BQ9C086 356 aaPredicted RBP31.56■■■□□ 2.64
BRF1-213ENST00000548421 IKZF4Q9H2S9 585 aa31.56■■■□□ 2.64
BRF1-213ENST00000548421 FANCLQ9NW38 375 aa31.56■■■□□ 2.64
BRF1-213ENST00000548421 PRKCBP05771 671 aa31.55■■■□□ 2.64
BRF1-213ENST00000548421 COL6A1P12109 1028 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms