RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 LETM2Q2VYF4 491 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 SMAP1Q8IYB5 467 aaPredicted RBP15.24■□□□□ 0.03
CCDC59-202ENST00000547758 BCL7CQ8WUZ0 217 aaPredicted RBP15.24■□□□□ 0.03
CCDC59-202ENST00000547758 FAM167AQ96KS9 214 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 GABBR1Q9UBS5 961 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 TCEAL9Q9UHQ7 104 aa15.24■□□□□ 0.03
CCDC59-202ENST00000547758 SMCO2A6NFE2 343 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 CFHP08603 1231 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 RFX1P22670 979 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 PUM1Q14671 1186 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC59-202ENST00000547758 C15orf39Q6ZRI6 1047 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 HINFPQ9BQA5 517 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 ZNF577Q9BSK1 485 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 NRDE2Q9H7Z3 1164 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 TBC1D22BQ9NU19 505 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 WNT16Q9UBV4 365 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 PCDHA10Q9Y5I2 948 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 KMT2BQ9UMN6 2715 aaPredicted RBP15.23■□□□□ 0.03
CCDC59-202ENST00000547758 ACACBO00763 2458 aa15.23■□□□□ 0.03
CCDC59-202ENST00000547758 MYH15Q9Y2K3 1946 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 KRBA1A5PL33 1030 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 hCG_1984214I3L0E3 225 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 GALTP07902 379 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 PHKA2P46019 1235 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 CLCN4P51793 760 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 SETQ01105 290 aaPredicted RBP15.22■□□□□ 0.03
CCDC59-202ENST00000547758 SPNS2Q8IVW8 549 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 ZNF713Q8N859 430 aaPredicted RBP15.22■□□□□ 0.03
CCDC59-202ENST00000547758 RIN2Q8WYP3 895 aaPredicted RBP15.22■□□□□ 0.03
CCDC59-202ENST00000547758 LPPQ93052 612 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 KLHL5Q96PQ7 755 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 VN1R3Q9BXE9 311 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 EMILIN2Q9BXX0 1053 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 LRRC2Q9BYS8 371 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 GLT8D2Q9H1C3 349 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 CHST12Q9NRB3 414 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
CCDC59-202ENST00000547758 GPR179Q6PRD1 2367 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 DOCK6Q96HP0 2047 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 N4BP1O75113 896 aaKnown RBP15.21■□□□□ 0.03
CCDC59-202ENST00000547758 CSDE1O75534 798 aaKnown RBP15.21■□□□□ 0.03
CCDC59-202ENST00000547758 OATP04181 439 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 CYP3A4P08684 503 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 KLRC2P26717 231 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 RNASELQ05823 741 aaKnown RBP15.21■□□□□ 0.03
CCDC59-202ENST00000547758 NONOQ15233 471 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC59-202ENST00000547758 LONRF3Q496Y0 759 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 NOMO2Q5JPE7 1267 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 JAKMIP3Q5VZ66 844 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 ZC3H14Q6PJT7 736 aaKnown RBP15.21■□□□□ 0.03
CCDC59-202ENST00000547758 GLB1LQ6UWU2 654 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 SGMS1Q86VZ5 419 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 CRYGNQ8WXF5 182 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 RSAD2Q8WXG1 361 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 TRAIPQ9BWF2 469 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 TBC1D17Q9HA65 648 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 RBM28Q9NW13 759 aaKnown RBP15.21■□□□□ 0.03
CCDC59-202ENST00000547758 BARHL2Q9NY43 387 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 DNAJB4Q9UDY4 337 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 CA14Q9ULX7 337 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 INPP5FQ9Y2H2 1132 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 SAMM50Q9Y512 469 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 PATJQ8NI35 1801 aa15.21■□□□□ 0.03
CCDC59-202ENST00000547758 TDRD15B5MCY1 1934 aaKnown RBP15.21■□□□□ 0.02
CCDC59-202ENST00000547758 ZNF862O60290 1169 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC59-202ENST00000547758 CNPP09543 421 aaKnown RBP15.2■□□□□ 0.02
CCDC59-202ENST00000547758 SKIP12755 728 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
CCDC59-202ENST00000547758 SLC11A1P49279 550 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 TBC1D8BQ0IIM8 1120 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 TWF2Q6IBS0 349 aaKnown RBP15.2■□□□□ 0.02
CCDC59-202ENST00000547758 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 CMASQ8NFW8 434 aaPredicted RBP15.2■□□□□ 0.02
CCDC59-202ENST00000547758 GCOM2Q9BZD3 368 aaPredicted RBP15.2■□□□□ 0.02
CCDC59-202ENST00000547758 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 NRBP2Q9NSY0 501 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 STK39Q9UEW8 545 aa15.2■□□□□ 0.02
CCDC59-202ENST00000547758 V9GY48 417 aaPredicted RBP15.2■□□□□ 0.02
CCDC59-202ENST00000547758 MEIS3P2A8K0S8 358 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 WDR64B1ANS9 1081 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 SRFP11831 508 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 SFPQP23246 707 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCDC59-202ENST00000547758 PRKCEQ02156 737 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 FUT2Q10981 343 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 SPECC1Q5M775 1068 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 APOA5Q6Q788 366 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 RUBCNQ92622 972 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 STAMQ92783 540 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 MAN1C1Q9NR34 630 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 DLL3Q9NYJ7 618 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 EPS15L1Q9UBC2 864 aa15.19■□□□□ 0.02
CCDC59-202ENST00000547758 PIN4Q9Y237 131 aaKnown RBP15.19■□□□□ 0.02
CCDC59-202ENST00000547758 CLUHO75153 1309 aa15.18■□□□□ 0.02
CCDC59-202ENST00000547758 FAM205CA6NFA0 338 aa15.18■□□□□ 0.02
CCDC59-202ENST00000547758 SLC27A2O14975 620 aa15.18■□□□□ 0.02
CCDC59-202ENST00000547758 B4GALT3O60512 393 aa15.18■□□□□ 0.02
CCDC59-202ENST00000547758 LILRB3O75022 631 aa15.18■□□□□ 0.02
CCDC59-202ENST00000547758 OFD1O75665 1012 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms