RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 RINT1Q6NUQ1 792 aa18.01■□□□□ 0.47
BRF1-208ENST00000546997 CYP26C1Q6V0L0 522 aa18.01■□□□□ 0.47
BRF1-208ENST00000546997 GBP6Q6ZN66 633 aa18.01■□□□□ 0.47
BRF1-208ENST00000546997 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
BRF1-208ENST00000546997 KIAA0895Q8NCT3 520 aa18.01■□□□□ 0.47
BRF1-208ENST00000546997 PCYT2Q99447 389 aa18.01■□□□□ 0.47
BRF1-208ENST00000546997 GPR20Q99678 358 aa18.01■□□□□ 0.47
BRF1-208ENST00000546997 RHOXF2Q9BQY4 288 aa18.01■□□□□ 0.47
BRF1-208ENST00000546997 IGKV6D-21A0A0A0MT36 114 aa18■□□□□ 0.47
BRF1-208ENST00000546997 BICDL2A1A5D9 508 aa18■□□□□ 0.47
BRF1-208ENST00000546997 STBD1O95210 358 aa18■□□□□ 0.47
BRF1-208ENST00000546997 IDEP14735 1019 aa18■□□□□ 0.47
BRF1-208ENST00000546997 PLA2G4FQ68DD2 849 aa18■□□□□ 0.47
BRF1-208ENST00000546997 ANKRD40Q6AI12 368 aa18■□□□□ 0.47
BRF1-208ENST00000546997 ANO5Q75V66 913 aa18■□□□□ 0.47
BRF1-208ENST00000546997 NOC3LQ8WTT2 800 aaKnown RBP18■□□□□ 0.47
BRF1-208ENST00000546997 COG1Q8WTW3 980 aa18■□□□□ 0.47
BRF1-208ENST00000546997 ATP6V0A1Q93050 837 aa18■□□□□ 0.47
BRF1-208ENST00000546997 SPATA33Q96N06 139 aa18■□□□□ 0.47
BRF1-208ENST00000546997 REEP2Q9BRK0 252 aa18■□□□□ 0.47
BRF1-208ENST00000546997 HPCAL4Q9UM19 191 aa18■□□□□ 0.47
BRF1-208ENST00000546997 SMPD1P17405 629 aa18■□□□□ 0.47
BRF1-208ENST00000546997 ARHGAP25P42331 645 aa18■□□□□ 0.47
BRF1-208ENST00000546997 RARRES1P49788 294 aa18■□□□□ 0.47
BRF1-208ENST00000546997 PRKCEQ02156 737 aa18■□□□□ 0.47
BRF1-208ENST00000546997 CKAP4Q07065 602 aaKnown RBP18■□□□□ 0.47
BRF1-208ENST00000546997 POLD4Q9HCU8 107 aa18■□□□□ 0.47
BRF1-208ENST00000546997 SLC39A2Q9NP94 309 aa18■□□□□ 0.47
BRF1-208ENST00000546997 ZNF302Q9NR11 478 aa18■□□□□ 0.47
BRF1-208ENST00000546997 MAFBQ9Y5Q3 323 aaPredicted RBP18■□□□□ 0.47
BRF1-208ENST00000546997 NOP56O00567 594 aaKnown RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 KRT18P05783 430 aaKnown RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 ATP4AP20648 1035 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 GSCP56915 257 aaPredicted RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 EHHADHQ08426 723 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 GIT2Q14161 759 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 C1orf186Q6ZWK4 172 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 TRAPPC11Q7Z392 1133 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 TRIM50Q86XT4 487 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 SEPT1Q8WYJ6 367 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 SUGCTQ9HAC7 445 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 BMP2KQ9NSY1 1161 aaPredicted RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 DBR1Q9UK59 544 aaKnown RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 ARHGEF35A5YM69 484 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 RSPH10B2B2RC85 870 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 RSPH10BP0C881 870 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 ZNF865P0CJ78 1059 aaPredicted RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 XRCC5P13010 732 aaKnown RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 NPEPPSP55786 919 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 COASYQ13057 564 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 DUSP28Q4G0W2 176 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 CD99L2Q8TCZ2 262 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 CPLX3Q8WVH0 158 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 TRIB2Q92519 343 aa17.99■□□□□ 0.47
BRF1-208ENST00000546997 TACO1Q9BSH4 297 aaKnown RBP17.99■□□□□ 0.47
BRF1-208ENST00000546997 DNAH12Q6ZR08 3092 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 FRMD3A2A2Y4 597 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 GPR25O00155 361 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 GH1P01241 217 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 GYPCP04921 128 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 CASP14P31944 242 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 PSMD2Q13200 908 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 CENPPQ6IPU0 288 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 PADI6Q6TGC4 694 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 EHBP1Q8NDI1 1231 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 LENG1Q96BZ8 264 aaPredicted RBP17.98■□□□□ 0.47
BRF1-208ENST00000546997 SEMA6BQ9H3T3 888 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 HAUS4Q9H6D7 363 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 PANK4Q9NVE7 773 aa17.98■□□□□ 0.47
BRF1-208ENST00000546997 KIF22Q14807 665 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 SPATS2Q86XZ4 545 aaKnown RBP17.97■□□□□ 0.47
BRF1-208ENST00000546997 GLIS3Q8NEA6 775 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 EMID1Q96A84 441 aaPredicted RBP17.97■□□□□ 0.47
BRF1-208ENST00000546997 MAGEC2Q9UBF1 373 aaPredicted RBP17.97■□□□□ 0.47
BRF1-208ENST00000546997 SEPT9Q9UHD8 586 aaPredicted RBP17.97■□□□□ 0.47
BRF1-208ENST00000546997 EBAG9O00559 213 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 FXR1P51114 621 aaKnown RBP eCLIP17.97■□□□□ 0.47
BRF1-208ENST00000546997 STAT5BP51692 787 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 UBXN1Q04323 297 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 LAMC2Q13753 1193 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 XKR9Q5GH70 373 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 PAPD7Q5XG87 772 aaKnown RBP17.97■□□□□ 0.47
BRF1-208ENST00000546997 IQSEC1Q6DN90 963 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 GUF1Q8N442 669 aaKnown RBP17.97■□□□□ 0.47
BRF1-208ENST00000546997 NOA1Q8NC60 698 aaKnown RBP17.97■□□□□ 0.47
BRF1-208ENST00000546997 ZNF507Q8TCN5 953 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 AFG1LQ8WV93 481 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 FGFBP2Q9BYJ0 223 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 ANKEF1Q9NU02 776 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 ABHD10Q9NUJ1 306 aa17.97■□□□□ 0.47
BRF1-208ENST00000546997 LGALS16A8MUM7 142 aa17.96■□□□□ 0.47
BRF1-208ENST00000546997 USO1O60763 962 aaKnown RBP17.96■□□□□ 0.47
BRF1-208ENST00000546997 LGR5O75473 907 aa17.96■□□□□ 0.47
BRF1-208ENST00000546997 ERLIN2O94905 339 aa17.96■□□□□ 0.47
BRF1-208ENST00000546997 TNFAIP2Q03169 654 aa17.96■□□□□ 0.47
BRF1-208ENST00000546997 PPFIA1Q13136 1202 aa17.96■□□□□ 0.47
BRF1-208ENST00000546997 IQCEQ6IPM2 695 aa17.96■□□□□ 0.47
BRF1-208ENST00000546997 FAM76AQ8TAV0 307 aa17.96■□□□□ 0.47
BRF1-208ENST00000546997 CCDC43Q96MW1 224 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms