RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 CYP3A4P08684 503 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 CLCN4P51793 760 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 FUT2Q10981 343 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 JAKMIP3Q5VZ66 844 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 SMAP1Q8IYB5 467 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-208ENST00000546534 RSAD2Q8WXG1 361 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 RIN2Q8WYP3 895 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-208ENST00000546534 LPPQ93052 612 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 FAM167AQ96KS9 214 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 KLHL5Q96PQ7 755 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 LARP6Q9BRS8 491 aaKnown RBP14.41□□□□□ -0.1
SCAF11-208ENST00000546534 TBC1D13Q9NVG8 400 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 BARHL2Q9NY43 387 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 WNT16Q9UBV4 365 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 DNAJB4Q9UDY4 337 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 DENND4AQ7Z401 1863 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 B4GALT3O60512 393 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 KLRC2P26717 231 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 PHKA2P46019 1235 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 SLC11A1P49279 550 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 LETM2Q2VYF4 491 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 NOMO2Q5JPE7 1267 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 APOA5Q6Q788 366 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 SGMS1Q86VZ5 419 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 EXOC6Q8TAG9 804 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 NLRP7Q8WX94 980 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 GBP3Q9H0R5 595 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 GLT8D2Q9H1C3 349 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 CHST12Q9NRB3 414 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 TCEAL9Q9UHQ7 104 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 INPP5FQ9Y2H2 1132 aa14.4□□□□□ -0.1
SCAF11-208ENST00000546534 CARNS1A5YM72 827 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 MEIS3P2A8K0S8 358 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 hCG_1984214I3L0E3 225 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 SLC27A2O14975 620 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 ADAMTS3O15072 1205 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 OATP04181 439 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 SSBP05455 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCAF11-208ENST00000546534 CNPP09543 421 aaKnown RBP14.39□□□□□ -0.11
SCAF11-208ENST00000546534 RNASELQ05823 741 aaKnown RBP14.39□□□□□ -0.11
SCAF11-208ENST00000546534 DRP2Q13474 957 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 PUM1Q14671 1186 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCAF11-208ENST00000546534 GLB1LQ6UWU2 654 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 SYNE3Q6ZMZ3 975 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 C15orf39Q6ZRI6 1047 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 ZNF713Q8N859 430 aaPredicted RBP14.39□□□□□ -0.11
SCAF11-208ENST00000546534 TMC2Q8TDI7 906 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 RSPH1Q8WYR4 309 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 EMILIN2Q9BXX0 1053 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 NRBP2Q9NSY0 501 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
SCAF11-208ENST00000546534 CA14Q9ULX7 337 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 SAMM50Q9Y512 469 aa14.39□□□□□ -0.11
SCAF11-208ENST00000546534 LILRB3O75022 631 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 OFD1O75665 1012 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 RFX1P22670 979 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 GBP2P32456 591 aaPredicted RBP14.38□□□□□ -0.11
SCAF11-208ENST00000546534 SETQ01105 290 aaPredicted RBP14.38□□□□□ -0.11
SCAF11-208ENST00000546534 PRKCEQ02156 737 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 PRR16Q569H4 304 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 TWF2Q6IBS0 349 aaKnown RBP14.38□□□□□ -0.11
SCAF11-208ENST00000546534 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 SLC44A3Q8N4M1 653 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 GCOM2Q9BZD3 368 aaPredicted RBP14.38□□□□□ -0.11
SCAF11-208ENST00000546534 TBC1D17Q9HA65 648 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 NCOR2Q9Y618 2525 aa14.38□□□□□ -0.11
SCAF11-208ENST00000546534 WDR64B1ANS9 1081 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 DCNP07585 359 aaKnown RBP14.37□□□□□ -0.11
SCAF11-208ENST00000546534 SP9P0CG40 484 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 TBC1D8BQ0IIM8 1120 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 UGCGQ16739 394 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 RTN1Q16799 776 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 DCLK2Q8N568 766 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 CMASQ8NFW8 434 aaPredicted RBP14.37□□□□□ -0.11
SCAF11-208ENST00000546534 DDX27Q96GQ7 796 aaKnown RBP14.37□□□□□ -0.11
SCAF11-208ENST00000546534 HINFPQ9BQA5 517 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 LSG1Q9H089 658 aaKnown RBP14.37□□□□□ -0.11
SCAF11-208ENST00000546534 WDR6Q9NNW5 1121 aaKnown RBP14.37□□□□□ -0.11
SCAF11-208ENST00000546534 MAN1C1Q9NR34 630 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 DISC1Q9NRI5 854 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 FAM105AQ9NUU6 356 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 DLGAP2Q9P1A6 1054 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
SCAF11-208ENST00000546534 PIN4Q9Y237 131 aaKnown RBP14.37□□□□□ -0.11
SCAF11-208ENST00000546534 A0A087WZ62 844 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 CCDC195A0A1B0GUA6 201 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 ZNF623O75123 536 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 KRT37O76014 449 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 DDHD2O94830 711 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 MYBP10242 640 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 SKIP12755 728 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 NONOQ15233 471 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCAF11-208ENST00000546534 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
SCAF11-208ENST00000546534 CREB3L3Q68CJ9 461 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 GPR152Q8TDT2 470 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 RUBCNQ92622 972 aa14.36□□□□□ -0.11
SCAF11-208ENST00000546534 MYADMQ96S97 322 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms