RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MGEA5O60502 916 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 ZNF131P52739 623 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 DMP1Q13316 513 aaPredicted RBP22.63■■□□□ 1.21
HMGA2-211ENST00000545998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.63■■□□□ 1.21
HMGA2-211ENST00000545998 CLEC17AQ6ZS10 378 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 CATSPER4Q7RTX7 472 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 DNAJC19Q96DA6 116 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 KIFC3Q9BVG8 833 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 C2orf40Q9H1Z8 148 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 TSPYL2Q9H2G4 693 aaPredicted RBP22.63■■□□□ 1.21
HMGA2-211ENST00000545998 INO80B-WBP1J3KQ70 363 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 ENPP3O14638 875 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 ACTN4O43707 911 aaKnown RBP22.62■■□□□ 1.21
HMGA2-211ENST00000545998 SLFN14P0C7P3 912 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 SYKP43405 635 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 KCNJ6P48051 423 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 DEFB103AP81534 67 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 DSC3Q14574 896 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 PCBP1Q15365 356 aaKnown RBP eCLIP22.62■■□□□ 1.214e-8■■□□□ 12
HMGA2-211ENST00000545998 DYMQ7RTS9 669 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 DEPTORQ8TB45 409 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 STAMQ92783 540 aa22.62■■□□□ 1.21
HMGA2-211ENST00000545998 NTPCRQ9BSD7 190 aaKnown RBP22.62■■□□□ 1.21
HMGA2-211ENST00000545998 CHD9Q3L8U1 2897 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 CCDC169A6NNP5 214 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 AMHR2Q16671 573 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 LONRF3Q496Y0 759 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 ZBTB8OSQ8IWT0 167 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 SPIRE2Q8WWL2 714 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 LRRC27Q9C0I9 530 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 PARVGQ9HBI0 331 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 AGPAT5Q9NUQ2 364 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 LARSQ9P2J5 1176 aaKnown RBP22.61■■□□□ 1.21
HMGA2-211ENST00000545998 ARHGAP28Q9P2N2 729 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 USP25Q9UHP3 1055 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 SERTAD1Q9UHV2 236 aa22.61■■□□□ 1.21
HMGA2-211ENST00000545998 TBCAO75347 108 aaKnown RBP22.6■■□□□ 1.21
HMGA2-211ENST00000545998 FAM13AO94988 1023 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 AMPD3Q01432 767 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 CEP57L1Q8IYX8 460 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 SLC9A7Q96T83 725 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 ADAM2Q99965 735 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 CCDC113Q9H0I3 377 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 FZD8Q9H461 694 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 KMT5AQ9NQR1 393 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 CHST12Q9NRB3 414 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 RGS18Q9NS28 235 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 KCNG1Q9UIX4 513 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 GBF1Q92538 1859 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 CDH23Q9H251 3354 aa22.6■■□□□ 1.21
HMGA2-211ENST00000545998 DENND3A2RUS2 1198 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 TSPAN1O60635 241 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 ATP2A2P16615 1042 aaKnown RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 HOXA11P31270 313 aaPredicted RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 EFNA5P52803 228 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 FAM187BQ17R55 369 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 LRIT3Q3SXY7 679 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 CNNM4Q6P4Q7 775 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 PPP4R3CPQ6ZMV5 832 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 MYCT1Q8N699 235 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 PHOSPHO2Q8TCD6 241 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 TRIM9Q9C026 710 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 PIN4Q9Y237 131 aaKnown RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 GADD45BO75293 160 aaPredicted RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 ERLIN2O94905 339 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 AMHP03971 560 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 ZSCAN20P17040 1043 aaPredicted RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 FAM109BQ6ICB4 259 aaPredicted RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 FMR1NBQ8N0W7 255 aaPredicted RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 PRIMPOLQ96LW4 560 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 C7orf25Q9BPX7 421 aa22.59■■□□□ 1.21
HMGA2-211ENST00000545998 PRMT7Q9NVM4 692 aaPredicted RBP22.59■■□□□ 1.21
HMGA2-211ENST00000545998 FRMD3A2A2Y4 597 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 SLC16A4O15374 487 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 ZNF202O95125 648 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 SMTNP53814 917 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 NCKAP1LP55160 1127 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 MAPK6Q16659 721 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 SLC24A5Q71RS6 500 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 MYOCDQ8IZQ8 938 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 TMEM161BQ8NDZ6 487 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 ENGASEQ8NFI3 743 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 TOP1MTQ969P6 601 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 FIZ1Q96SL8 496 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 ZHX3Q9H4I2 956 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 C1orf112Q9NSG2 853 aa22.58■■□□□ 1.2
HMGA2-211ENST00000545998 CHD7Q9P2D1 2997 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 C9IYK1 514 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 B4GALT5O43286 388 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 PRKCBP05771 671 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 AXLP30530 894 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 SNW1Q13573 536 aaKnown RBP22.57■■□□□ 1.2
HMGA2-211ENST00000545998 TAS1R3Q7RTX0 852 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 TMCO2Q7Z6W1 182 aaPredicted RBP22.57■■□□□ 1.2
HMGA2-211ENST00000545998 GRAMD1CQ8IYS0 662 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 CRIPAKQ8N1N5 446 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 PAGE5Q96GU1 130 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 TMEM134Q9H6X4 195 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 PHLPP2Q6ZVD8 1323 aa22.57■■□□□ 1.2
HMGA2-211ENST00000545998 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms