RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MARCH10Q8NA82 808 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 MYCBPAPQ8TBZ2 947 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 ZNF473Q8WTR7 871 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 TGFBRAP1Q8WUH2 860 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 HDAC7Q8WUI4 952 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 TMEM174Q8WUU8 243 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 DCAF4Q8WV16 495 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 RIN2Q8WYP3 895 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 TBC1D5Q92609 795 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 ARL8AQ96BM9 186 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 SPAG5Q96R06 1193 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 PIGSQ96S52 555 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 CCT8L2Q96SF2 557 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 KRT12Q99456 494 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 TMEM109Q9BVC6 243 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 EHD4Q9H223 541 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 CARD9Q9H257 536 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 KCNMB3Q9NPA1 279 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 TYW1Q9NV66 732 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 KCND2Q9NZV8 630 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 RASAL2Q9UJF2 1139 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 NFU1Q9UMS0 254 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 UTP11Q9Y3A2 253 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 ZNF536O15090 1300 aa7.02□□□□□ -1.28
SNHG1-225ENST00000545920 COL16A1Q07092 1604 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 BAZ2AQ9UIF9 1905 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 CCDC169A6NNP5 214 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 H0YGN5 161 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 ZBTB5O15062 677 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 ADAMTS3O15072 1205 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 P4HA2O15460 535 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 RAD51CO43502 376 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 TRAPPC3O43617 180 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PPFIA2O75334 1257 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 BBOX1O75936 387 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 NUDT17P0C025 328 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 TMEM253P0C7T8 217 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 XRCC5P13010 732 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 UCHL3P15374 230 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 CYP11B2P19099 503 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 KLRC1P26715 233 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 RPA1P27694 616 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 HNRNPH1P31943 449 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 SLC8A1P32418 973 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 CTNNA1P35221 906 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 RDXP35241 583 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 GRM5P41594 1212 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 STAT1P42224 750 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 BTDP43251 543 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PPP2R2AP63151 447 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 TAGLNQ01995 201 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 DHX9Q08211 1270 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PDCLQ13371 301 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PPP2R5AQ15172 486 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 EZH2Q15910 746 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 KNOP1Q1ED39 458 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 Q4G0T1 1027 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 HERC4Q5GLZ8 1057 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 CEP85LQ5SZL2 805 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 TBC1D9BQ66K14 1250 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 EPM2AIP1Q7L775 607 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PEX26Q7Z412 305 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 IRF2BP2Q7Z5L9 587 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 GPBP1Q86WP2 473 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 RHOT2Q8IXI1 618 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 GSPT2Q8IYD1 628 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 TNS4Q8IZW8 715 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 ANKS4BQ8N8V4 417 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 SYT2Q8N9I0 419 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 SMCR8Q8TEV9 937 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 SCG3Q8WXD2 468 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 IFT81Q8WYA0 676 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PIK3R5Q8WYR1 880 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 RFFLQ8WZ73 363 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 DYNLL2Q96FJ2 89 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PGM2Q96G03 612 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 CEP95Q96GE4 821 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 DRC1Q96MC2 740 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 PLIN2Q99541 437 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 POLR3CQ9BUI4 534 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 MRIQ9BWK5 157 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 MOV10L1Q9BXT6 1211 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 DHX36Q9H2U1 1008 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 CCDC134Q9H6E4 229 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 OLFML3Q9NRN5 406 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 TFCP2L1Q9NZI6 479 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 ANKIB1Q9P2G1 1089 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 SLC12A6Q9UHW9 1150 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 CNOT7Q9UIV1 285 aaKnown RBP7.02□□□□□ -1.29
SNHG1-225ENST00000545920 SALL4Q9UJQ4 1053 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 NAGPAQ9UK23 515 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 HDAC9Q9UKV0 1011 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 AMFRQ9UKV5 643 aa7.02□□□□□ -1.29
SNHG1-225ENST00000545920 DNM3Q9UQ16 869 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms