RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 NIFKQ9BYG3 293 aaKnown RBP16.63■□□□□ 0.25
RTN3-214ENST00000545432 LRRC2Q9BYS8 371 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 GCOM2Q9BZD3 368 aaPredicted RBP16.63■□□□□ 0.25
RTN3-214ENST00000545432 DNAJB4Q9UDY4 337 aa16.63■□□□□ 0.25
RTN3-214ENST00000545432 MEIS3P2A8K0S8 358 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 CSDE1O75534 798 aaKnown RBP16.62■□□□□ 0.25
RTN3-214ENST00000545432 SRFP11831 508 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 KLRC2P26717 231 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 RAB27AP51159 221 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 RCAN1P53805 252 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 DRP2Q13474 957 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 CREB3L3Q68CJ9 461 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 MRPL10Q7Z7H8 261 aaKnown RBP16.62■□□□□ 0.25
RTN3-214ENST00000545432 ZNF410Q86VK4 478 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 ZNF280BQ86YH2 543 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 RNF168Q8IYW5 571 aaPredicted RBP16.62■□□□□ 0.25
RTN3-214ENST00000545432 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 HDAC7Q8WUI4 952 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 RIT2Q99578 217 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 TMEM175Q9BSA9 504 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 INO80BQ9C086 356 aaPredicted RBP16.62■□□□□ 0.25
RTN3-214ENST00000545432 DISC1Q9NRI5 854 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 FAM105AQ9NUU6 356 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 DMXL1Q9Y485 3027 aa16.62■□□□□ 0.25
RTN3-214ENST00000545432 SP9P0CG40 484 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 CA8P35219 290 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 PRKCEQ02156 737 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 NONOQ15233 471 aaKnown RBP eCLIP16.61■□□□□ 0.25
RTN3-214ENST00000545432 PFKFB3Q16875 520 aaPredicted RBP16.61■□□□□ 0.25
RTN3-214ENST00000545432 B3GNT9Q6UX72 402 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 SYNE3Q6ZMZ3 975 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 AGMOQ6ZNB7 445 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 TRMT1LQ7Z2T5 733 aaKnown RBP16.61■□□□□ 0.25
RTN3-214ENST00000545432 KIAA2013Q8IYS2 634 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 SUMF1Q8NBK3 374 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 NLRP7Q8WX94 980 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 RSAD2Q8WXG1 361 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 RUBCNQ92622 972 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 LPPQ93052 612 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 RXFP1Q9HBX9 757 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 R4GN57 208 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 FANCMQ8IYD8 2048 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 WDR87Q6ZQQ6 2873 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 CACNA1IQ9P0X4 2223 aa16.61■□□□□ 0.25
RTN3-214ENST00000545432 A0A087WZ62 844 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 ANHXE9PGG2 379 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 DDHD2O94830 711 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 ALDH2P05091 517 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
RTN3-214ENST00000545432 CDC27P30260 824 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 UGCGQ16739 394 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 RTN1Q16799 776 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 MAML2Q8IZL2 1156 aaPredicted RBP16.6■□□□□ 0.25
RTN3-214ENST00000545432 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 MYADMQ96S97 322 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
RTN3-214ENST00000545432 TBC1D17Q9HA65 648 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 SLC2A4RGQ9NR83 387 aa16.6■□□□□ 0.25
RTN3-214ENST00000545432 C2orf16Q68DN1 1984 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 DOCK8Q8NF50 2099 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 CCDC195A0A1B0GUA6 201 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 INPPL1O15357 1258 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 MSH4O15457 936 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 SOD2P04179 222 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 CFHP08603 1231 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 SFNP31947 248 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 TSGA10IPQ3SY00 556 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 PRR16Q569H4 304 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 XKR3Q5GH77 459 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 KIAA0319Q5VV43 1072 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 ZC3H14Q6PJT7 736 aaKnown RBP16.59■□□□□ 0.25
RTN3-214ENST00000545432 POTEGQ6S5H5 508 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 C1orf210Q8IVY1 113 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 GPR65Q8IYL9 337 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 RDM1Q8NG50 284 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 STAMQ92783 540 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 SLC5A5Q92911 643 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 ZNF707Q96C28 371 aaPredicted RBP16.59■□□□□ 0.25
RTN3-214ENST00000545432 PGBD4Q96DM1 585 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 RPS6KC1Q96S38 1066 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 MRPL17Q9NRX2 175 aaKnown RBP16.59■□□□□ 0.25
RTN3-214ENST00000545432 KANSL3Q9P2N6 904 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 DPP7Q9UHL4 492 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 CLUHO75153 1309 aa16.59■□□□□ 0.25
RTN3-214ENST00000545432 ACACBO00763 2458 aa16.58■□□□□ 0.25
RTN3-214ENST00000545432 NRP1O14786 923 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 ZBTB43O43298 467 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 GLULP15104 373 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 AFF1P51825 1210 aaKnown RBP16.58■□□□□ 0.24
RTN3-214ENST00000545432 JAK3P52333 1124 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 STARD6P59095 220 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 RNASELQ05823 741 aaKnown RBP16.58■□□□□ 0.24
RTN3-214ENST00000545432 ZNF528Q3MIS6 628 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
RTN3-214ENST00000545432 HERC2P3Q9BVR0 1158 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 IFT122Q9HBG6 1241 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 MAN1C1Q9NR34 630 aa16.58■□□□□ 0.24
RTN3-214ENST00000545432 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms