RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 DYMQ7RTS9 669 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 MYCT1Q8N699 235 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 SCLYQ96I15 445 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 OSMRQ99650 979 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 MTIF3Q9H2K0 278 aaKnown RBP12.97□□□□□ -0.33
SNHG1-221ENST00000544983 ST6GALNAC4Q9H4F1 302 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 KMT5AQ9NQR1 393 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 PANK4Q9NVE7 773 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 PRMT7Q9NVM4 692 aaPredicted RBP12.97□□□□□ -0.33
SNHG1-221ENST00000544983 ARHGAP28Q9P2N2 729 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 MYH11P35749 1972 aa12.97□□□□□ -0.33
SNHG1-221ENST00000544983 ABHD14A-ACY1A0A1B0GW23 586 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 K7ERI5 159 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 TRAK2O60296 914 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 NR1I2O75469 434 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 MBD3O95983 291 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 GHRP10912 638 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 IDEP14735 1019 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 BMP8BP34820 402 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 MAGEA10P43363 369 aaPredicted RBP12.96□□□□□ -0.33
SNHG1-221ENST00000544983 AFMP43652 599 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 IKBKEQ14164 716 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 GPNMBQ14956 572 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 MAPK6Q16659 721 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 HERC4Q5GLZ8 1057 aaPredicted RBP12.96□□□□□ -0.33
SNHG1-221ENST00000544983 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 KSR1Q8IVT5 923 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 FAM178BQ8IXR5 827 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 HVCN1Q96D96 273 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 CDHR5Q9HBB8 845 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 DACT1Q9NYF0 836 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 PADI3Q9ULW8 664 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 LTBP2Q14767 1821 aa12.96□□□□□ -0.33
SNHG1-221ENST00000544983 NPHP3-ACAD11A0A0J9YXS1 232 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 SFI1A8K8P3 1242 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 INO80B-WBP1J3KQ70 363 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 ERLIN2O94905 339 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 SMC2O95347 1197 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 FGBP02675 491 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 LIG1P18858 919 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 MCM4P33991 863 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 NCKAP1LP55160 1127 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 PSMD2Q13200 908 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 POSTNQ15063 836 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 TPRNQ4KMQ1 711 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 CATSPER4Q7RTX7 472 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 FAM228AQ86W67 206 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 TMEM40Q8WWA1 233 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 BSNDQ8WZ55 320 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 CCDC51Q96ER9 411 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 GSDMAQ96QA5 445 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 GDF15Q99988 308 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 FZD8Q9H461 694 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 ZHX3Q9H4I2 956 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 ERVK-5Q9HDB9 667 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 RMND1Q9NWS8 449 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 ST3GAL5Q9UNP4 418 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 NOC2LQ9Y3T9 749 aaKnown RBP12.95□□□□□ -0.34
SNHG1-221ENST00000544983 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
SNHG1-221ENST00000544983 ACKR2O00590 384 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 SKIP12755 728 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 ZSCAN20P17040 1043 aaPredicted RBP12.94□□□□□ -0.34
SNHG1-221ENST00000544983 CD52P31358 61 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
SNHG1-221ENST00000544983 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
SNHG1-221ENST00000544983 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 DPYDQ12882 1025 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 NFX1Q12986 1120 aaKnown RBP12.94□□□□□ -0.34
SNHG1-221ENST00000544983 STRN3Q13033 797 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 KCNB1Q14721 858 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 ZNF720Q7Z2F6 126 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 HAUS6Q7Z4H7 955 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 APBB1IPQ7Z5R6 666 aaPredicted RBP12.94□□□□□ -0.34
SNHG1-221ENST00000544983 DBF4BQ8NFT6 615 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 STAMQ92783 540 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 PPP1R16BQ96T49 567 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 TRAIPQ9BWF2 469 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 AGO3Q9H9G7 860 aaKnown RBP12.94□□□□□ -0.34
SNHG1-221ENST00000544983 MRPL44Q9H9J2 332 aaKnown RBP12.94□□□□□ -0.34
SNHG1-221ENST00000544983 C1orf112Q9NSG2 853 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 AGPAT5Q9NUQ2 364 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 EXOC1Q9NV70 894 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
SNHG1-221ENST00000544983 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 EIF3DO15371 548 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNHG1-221ENST00000544983 SLC16A4O15374 487 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 KIF20AO95235 890 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
SNHG1-221ENST00000544983 PRKCBP05771 671 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 GTF2BQ00403 316 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 EHHADHQ08426 723 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 COASYQ13057 564 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 CUL4BQ13620 913 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 FAM26FQ5R3K3 315 aa12.93□□□□□ -0.34
SNHG1-221ENST00000544983 TMEM240Q5SV17 173 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms