RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ADRB2P07550 413 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 VCAM1P19320 739 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 SOX5P35711 763 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 SCARA3Q6AZY7 606 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 EEPD1Q7L9B9 569 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 HAUS6Q7Z4H7 955 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 CNPY4Q8N129 248 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 RPGRIP1Q96KN7 1286 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 GPR88Q9GZN0 384 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 COG5Q9UP83 839 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
SNRNP70-203ENST00000544278 IBSPP21815 317 aaPredicted RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 YWHABP31946 246 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 FSTL1Q12841 308 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 BFSP1Q12934 665 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 RNF10Q8N5U6 811 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 EDEM3Q9BZQ6 932 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 METTL14Q9HCE5 456 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 SART1O43290 800 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 SGPL1O95470 568 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 ZC3H3Q8IXZ2 948 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 CYP26A1O43174 497 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 MESDQ14696 234 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 UBAP2Q5T6F2 1119 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 ARHGEF16Q5VV41 709 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 PRPF38AQ8NAV1 312 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 JDP2Q8WYK2 163 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 KRT35Q92764 455 aa17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 NUCKS1Q9H1E3 243 aaKnown RBP17.11■□□□□ 0.33
SNRNP70-203ENST00000544278 ICAM1P05362 532 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 GAP43P17677 238 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 JAM2P57087 298 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 CIAPIN1Q6FI81 312 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 LRRC57Q8N9N7 239 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 SYN2Q92777 582 aaPredicted RBP17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 IQCDQ96DY2 449 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 ERVK-5Q9HDB9 667 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 CTTNBP2NLQ9P2B4 639 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 FEM1BQ9UK73 627 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 PTGER2P43116 358 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 CHADLQ6NUI6 762 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 FAM76AQ8TAV0 307 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 SEMA4DQ92854 862 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 HSPBP1Q9NZL4 362 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
SNRNP70-203ENST00000544278 KRT13P13646 458 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 NF2P35240 595 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 CFAP58Q5T655 872 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 SLC47A2Q86VL8 602 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 OLIG1Q8TAK6 271 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 FAM118BQ9BPY3 351 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 AGO4Q9HCK5 861 aaKnown RBP17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 BMT2Q1RMZ1 405 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 RNF207Q6ZRF8 634 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 CTNNBL1Q8WYA6 563 aaPredicted RBP17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 ALG3Q92685 438 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 DEFB129Q9H1M3 183 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 APEX2Q9UBZ4 518 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 HACL1Q9UJ83 578 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 PHF20L1A8MW92 1017 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 HSF2BPO75031 334 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 VAMP7P51809 220 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 DCAF12L1Q5VU92 463 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 TRIM7Q9C029 511 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 GABBR1Q9UBS5 961 aa17.09■□□□□ 0.33
SNRNP70-203ENST00000544278 ZNF233A6NK53 670 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 FTLP02792 175 aaPredicted RBP17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 CCT5P48643 541 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 GMPSP49915 693 aaPredicted RBP17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 EPHB4P54760 987 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 GNGT1P63211 74 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 CEP85LQ5SZL2 805 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 SWSAP1Q6NVH7 229 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 IFT20Q8IY31 132 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 GOLGA5Q8TBA6 731 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 UBLCP1Q8WVY7 318 aaPredicted RBP17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 MED4Q9NPJ6 270 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 RNF146Q9NTX7 359 aa17.08■□□□□ 0.33
SNRNP70-203ENST00000544278 P4HBP07237 508 aaKnown RBP17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 PGM5Q15124 567 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 SNRNP48Q6IEG0 339 aaKnown RBP17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 FAM212AQ96EL1 285 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 WRNIP1Q96S55 665 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 PCDHB18PQ96TA0 734 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms