RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ARL4CP56559 192 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 DMGDHQ9UI17 866 aaKnown RBP20.7■□□□□ 0.9
SUDS3-204ENST00000543473 PNPLA7Q6ZV29 1317 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 USP38Q8NB14 1042 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 FAM161BQ96MY7 647 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 NEURL4Q96JN8 1562 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 STXBP3O00186 592 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 GCLMP48507 274 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
SUDS3-204ENST00000543473 PAPD7Q5XG87 772 aaKnown RBP20.7■□□□□ 0.9
SUDS3-204ENST00000543473 SLC30A9Q6PML9 568 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 TRIML2Q8N7C3 387 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 PDZD8Q8NEN9 1154 aa20.7■□□□□ 0.9
SUDS3-204ENST00000543473 ACTN1P12814 892 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 BARGINQ6ZT62 677 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 ZBTB8OSQ8IWT0 167 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 LINC00116Q8NCU8 138 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 CEP70Q8NHQ1 597 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 EFHD1Q9BUP0 239 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 USP17L5A8MUK1 530 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 CD44P16070 742 aaKnown RBP20.69■□□□□ 0.9
SUDS3-204ENST00000543473 POLGP54098 1239 aaPredicted RBP20.69■□□□□ 0.9
SUDS3-204ENST00000543473 MCF2L2Q86YR7 1114 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 GLG1Q92896 1179 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 NOD2Q9HC29 1040 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 HESX1Q9UBX0 185 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 CFLARO15519 480 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 TDP2O95551 362 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 MDM2Q00987 491 aaPredicted RBP20.69■□□□□ 0.9
SUDS3-204ENST00000543473 SERPINI1Q99574 410 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 C7orf25Q9BPX7 421 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 WNT8AQ9H1J5 351 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 KLRC1P26715 233 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 MIGA2Q7L4E1 593 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 SNF8Q96H20 258 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 NUP85Q9BW27 656 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 SMYD2Q9NRG4 433 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 PCDHA6Q9UN73 950 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 G3BP2Q9UN86 482 aaKnown RBP20.69■□□□□ 0.9
SUDS3-204ENST00000543473 PCDHA8Q9Y5H6 950 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 DUSP10Q9Y6W6 482 aa20.69■□□□□ 0.9
SUDS3-204ENST00000543473 GGPS1O95749 300 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 CIAPIN1Q6FI81 312 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 C1orf54Q8WWF1 131 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 AFG3L2Q9Y4W6 797 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 SCINQ9Y6U3 715 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 GOLGA8QA0A0J9YX86 632 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 GOLGA8OA6NCC3 632 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 GOLGA8NF8WBI6 632 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 KLC1Q07866 573 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 RC3H1Q5TC82 1133 aaKnown RBP20.68■□□□□ 0.9
SUDS3-204ENST00000543473 PCGF5Q86SE9 256 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 LRRC43Q8N309 656 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 ARHGAP18Q8N392 663 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 ANKS1AQ92625 1134 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 CFAP36Q96G28 342 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 PLAGL2Q9UPG8 496 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 GSTA1P08263 222 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 GSTA2P09210 222 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 ECE1P42892 770 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 PHEXP78562 749 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 SLC44A5Q8NCS7 719 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 ERGIC2Q96RQ1 377 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 ADAM22Q9P0K1 906 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 LCMT1Q9UIC8 334 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 PFASO15067 1338 aa20.68■□□□□ 0.9
SUDS3-204ENST00000543473 DNAJC8O75937 253 aaPredicted RBP20.67■□□□□ 0.9
SUDS3-204ENST00000543473 TTC4O95801 387 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 HSD17B3P37058 310 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 ALCAMQ13740 583 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 NAB2Q15742 525 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 RAPH1Q70E73 1250 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 PODNQ7Z5L7 613 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 PACS2Q86VP3 889 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 KIF2BQ8N4N8 673 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 KCTD6Q8NC69 237 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 NDE1Q9NXR1 346 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 DBR1Q9UK59 544 aaKnown RBP20.67■□□□□ 0.9
SUDS3-204ENST00000543473 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.67■□□□□ 0.9
SUDS3-204ENST00000543473 A6NJR5 290 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 BMP3P12645 472 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 SOX5P35711 763 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 GPSM2P81274 684 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 HP1BP3Q5SSJ5 553 aaPredicted RBP20.67■□□□□ 0.9
SUDS3-204ENST00000543473 GADL1Q6ZQY3 521 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 MORC4Q8TE76 937 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 DNAJC7Q99615 494 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 LACRTQ9GZZ8 138 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 SMYD3Q9H7B4 428 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.67■□□□□ 0.9
SUDS3-204ENST00000543473 AP2B1P63010 937 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 FRMD5Q7Z6J6 570 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 POTEFA5A3E0 1075 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 POTEIP0CG38 1075 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 GALCP54803 685 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 POTEGQ6S5H5 508 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 POTEEQ6S8J3 1075 aa20.67■□□□□ 0.9
SUDS3-204ENST00000543473 RBM41Q96IZ5 413 aaKnown RBP20.67■□□□□ 0.9
SUDS3-204ENST00000543473 ITSN1Q15811 1721 aa20.66■□□□□ 0.9
SUDS3-204ENST00000543473 SORBS3O60504 671 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms