RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 TRIM16LQ309B1 348 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 PAGE5Q96GU1 130 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 ZNF594Q96JF6 807 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-215ENST00000543185 LOC102724159A0A0B4J2E5 919 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 TP53BP2Q13625 1128 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 PWP2Q15269 919 aaKnown RBP20.54■□□□□ 0.88
HDAC4-215ENST00000543185 PI4K2BQ8TCG2 481 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 UVRAGQ9P2Y5 699 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 PPP1R37O75864 691 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 IFNAR1P17181 557 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 ACBD5Q5T8D3 534 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-215ENST00000543185 ADGRA3Q8IWK6 1321 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 PRPF3O43395 683 aaKnown RBP20.54■□□□□ 0.88
HDAC4-215ENST00000543185 SPAG6O75602 509 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 FAM149B1Q96BN6 582 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 SMYD4Q8IYR2 804 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 PTPRTO14522 1441 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 FRMPD2Q68DX3 1309 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 ZSCAN20P17040 1043 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 FAM47AQ5JRC9 791 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 G2E3Q7L622 706 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 HDDC2Q7Z4H3 204 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 RNF217Q8TC41 542 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 TRIM63Q969Q1 353 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 TCP11X1B4DZS4 312 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 SMAPO00193 183 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 CYP2C19P33261 490 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 CFAP69A5D8W1 941 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 GOLGA8SH3BPF8 625 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 LAMC2Q13753 1193 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 PPP6R3Q5H9R7 873 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 AGBL2Q5U5Z8 902 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 UNC13DQ70J99 1090 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 TRIM54Q9BYV2 358 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 MTO1Q9Y2Z2 717 aaKnown RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 SERPINB3P29508 390 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 RABGAP1LQ5R372 815 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 TAB3Q8N5C8 712 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 FAM167BQ9BTA0 163 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 MDH1P40925 334 aaKnown RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 POLA2Q14181 598 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 ELMSAN1Q6PJG2 1045 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 TRPM8Q7Z2W7 1104 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 ST13P5Q8NFI4 369 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 HIC2Q96JB3 615 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 GINS4Q9BRT9 223 aa20.53■□□□□ 0.88
HDAC4-215ENST00000543185 SAMSN1Q9NSI8 373 aaKnown RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 KLHL8Q9P2G9 620 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-215ENST00000543185 EFHBQ8N7U6 833 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 CCT8L2Q96SF2 557 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 TRIP13Q15645 432 aaPredicted RBP20.52■□□□□ 0.88
HDAC4-215ENST00000543185 BEGAINQ9BUH8 593 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 NUP85Q9BW27 656 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 ZHX2Q9Y6X8 837 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 A0A1W2PQC6 194 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 ADCK5Q3MIX3 580 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 IP6K2Q9UHH9 426 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 PER1O15534 1290 aaPredicted RBP20.52■□□□□ 0.88
HDAC4-215ENST00000543185 GPS1Q13098 491 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 ERICH1Q86X53 443 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 OLFML3Q9NRN5 406 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 HPCAL4Q9UM19 191 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 JAK3P52333 1124 aa20.52■□□□□ 0.88
HDAC4-215ENST00000543185 NUP153P49790 1475 aaKnown RBP20.52■□□□□ 0.88
HDAC4-215ENST00000543185 ORC4O43929 436 aa20.52■□□□□ 0.87
HDAC4-215ENST00000543185 TAF5LO75529 589 aa20.52■□□□□ 0.87
HDAC4-215ENST00000543185 ACTN3Q08043 901 aaPredicted RBP20.52■□□□□ 0.87
HDAC4-215ENST00000543185 PRG3Q9Y2Y8 225 aaPredicted RBP20.52■□□□□ 0.87
HDAC4-215ENST00000543185 E5RI56 91 aa20.52■□□□□ 0.87
HDAC4-215ENST00000543185 CNPY3Q9BT09 278 aa20.52■□□□□ 0.87
HDAC4-215ENST00000543185 FAM47DPA6NHR8 397 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 H0YIN7 160 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 DDHD1Q8NEL9 900 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 ULK4Q96C45 1275 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 RUBCNLQ9H714 662 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 CNGB3Q9NQW8 809 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 SELENONQ9NZV5 590 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 CDY2AQ9Y6F7 541 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 CDY1Q9Y6F8 540 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 PZPP20742 1482 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 KIF22Q14807 665 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 GIMAP8Q8ND71 665 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-215ENST00000543185 HINFPQ9BQA5 517 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 MAP3K15Q6ZN16 1313 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 MAP3K13O43283 966 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 TCIRG1Q13488 830 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 RYBPQ8N488 228 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-215ENST00000543185 PALD1Q9ULE6 856 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 hCG_2014768A0A024R1R8 64 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 SLC1A1P43005 524 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 CCDC137Q6PK04 289 aaKnown RBP20.51■□□□□ 0.87
HDAC4-215ENST00000543185 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 EPHB1P54762 984 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 ABHD8Q96I13 439 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 ROR1Q01973 937 aa20.51■□□□□ 0.87
HDAC4-215ENST00000543185 ZMYND8Q9ULU4 1186 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-215ENST00000543185 H2AFYO75367 372 aaKnown RBP20.5■□□□□ 0.87
HDAC4-215ENST00000543185 PLA2G4BP0C869 781 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms