RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PDXKO00764 312 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 GRIN2DO15399 1336 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 CALUO43852 315 aaPredicted RBP11.73□□□□□ -0.53
DDB1-221ENST00000543162 VTNP04004 478 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 PHKA2P46019 1235 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 STRN3Q13033 797 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 ZCWPW2Q504Y3 356 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 GDF6Q6KF10 455 aaPredicted RBP11.73□□□□□ -0.53
DDB1-221ENST00000543162 TAF2Q6P1X5 1199 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 FOXR2Q6PJQ5 311 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 RUFY4Q6ZNE9 571 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 HS2ST1Q7LGA3 356 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 CSGALNACT2Q8N6G5 542 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 NOC3LQ8WTT2 800 aaKnown RBP11.73□□□□□ -0.53
DDB1-221ENST00000543162 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 DUSP9Q99956 384 aaKnown RBP11.73□□□□□ -0.53
DDB1-221ENST00000543162 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 STARD7Q9NQZ5 370 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
DDB1-221ENST00000543162 FANCLQ9NW38 375 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 OGDHLQ9ULD0 1010 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 HTTP42858 3142 aa11.73□□□□□ -0.53
DDB1-221ENST00000543162 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 ZMYM2Q9UBW7 1377 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 FGFR1OPO95684 399 aaKnown RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 CDC42EP1Q00587 391 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 PTPN11Q06124 597 aaPredicted RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 POU5F1BQ06416 359 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 EDRF1Q3B7T1 1238 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 CDCA2Q69YH5 1023 aaPredicted RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 MAP4K3Q8IVH8 894 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 GOLGA5Q8TBA6 731 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 U2AF1L4Q8WU68 220 aaKnown RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 NLRP7Q8WX94 980 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 KCNN1Q92952 543 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 ZNF668Q96K58 619 aaPredicted RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 SRRTQ9BXP5 876 aaKnown RBP11.72□□□□□ -0.53
DDB1-221ENST00000543162 TMEM134Q9H6X4 195 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 TRAF3IP3Q9Y228 551 aa11.72□□□□□ -0.53
DDB1-221ENST00000543162 A0A087WZ62 844 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 A0A0U1RQG5 324 aaPredicted RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 TGFB1I1O43294 461 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 SGPL1O95470 568 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 CDK11BP21127 795 aaKnown RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 RPL13P26373 211 aaKnown RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 GPC3P51654 580 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 NLRP11P59045 1033 aaKnown RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 PTENP60484 403 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 SNRPFP62306 86 aaKnown RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 PLCB2Q00722 1185 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 PTGISQ16647 500 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 MAPK6Q16659 721 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 HSP90AA4PQ58FG1 418 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 RSPH3Q86UC2 560 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 SERINC5Q86VE9 423 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 ZNF410Q86VK4 478 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 FAM114A1Q8IWE2 563 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 ZNF710Q8N1W2 664 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 NME8Q8N427 588 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 BICD1Q96G01 975 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 FDXACB1Q9BRP7 624 aaPredicted RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 NFKBIZQ9BYH8 718 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 HSD3B7Q9H2F3 369 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 IKZF4Q9H2S9 585 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 THAP9Q9H5L6 903 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 AGPAT3Q9NRZ7 376 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 SAMSN1Q9NSI8 373 aaKnown RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 CGNQ9P2M7 1197 aaKnown RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 MAGEC2Q9UBF1 373 aaPredicted RBP11.71□□□□□ -0.53
DDB1-221ENST00000543162 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
DDB1-221ENST00000543162 INO80B-WBP1J3KQ70 363 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
DDB1-221ENST00000543162 CETN3O15182 167 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 CLIC2O15247 247 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 NR3C1P04150 777 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 RPLP2P05387 115 aaKnown RBP11.7□□□□□ -0.54
DDB1-221ENST00000543162 PRKCBP05771 671 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 ZNF18P17022 549 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 NR2F2P24468 414 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 LIG4P49917 911 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 SPAG1Q07617 926 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 ADAM9Q13443 819 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 KIZQ2M2Z5 673 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 CDKAL1Q5VV42 579 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 LRRC55Q6ZSA7 311 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
DDB1-221ENST00000543162 SLC43A3Q8NBI5 491 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
DDB1-221ENST00000543162 EEF2KMTQ96G04 330 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms