RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 TTC7AQ9ULT0 858 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-215ENST00000543155 SART1O43290 800 aaKnown RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 ABCB4P21439 1286 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 RXRBP28702 533 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 YWHABP31946 246 aaKnown RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 SNRPFP62306 86 aaKnown RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 DLG4P78352 724 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 CPXCR1Q8N123 301 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 PIK3R5Q8WYR1 880 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 AGPAT1Q99943 283 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 KIAA1683Q9H0B3 1180 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 SLC38A10Q9HBR0 1119 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 RAVER2Q9HCJ3 691 aaKnown RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 SEPT11Q9NVA2 429 aaKnown RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 ANKRD62A6NC57 917 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 FOXN3O00409 490 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 LRRN2O75325 713 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 SKOR1P84550 965 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 GTF2BQ00403 316 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 HLTFQ14527 1009 aaKnown RBP eCLIP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 EPC2Q52LR7 807 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 CBWD1Q9BRT8 395 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 DDX47Q9H0S4 455 aaKnown RBP20.18■□□□□ 0.82
COPS7A-215ENST00000543155 HSPBP1Q9NZL4 362 aa20.18■□□□□ 0.82
COPS7A-215ENST00000543155 ZNF233A6NK53 670 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 TISP43B9A030 160 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 ECHS1P30084 290 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 IRAK1P51617 712 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 PPP3CAQ08209 521 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 HAUS6Q7Z4H7 955 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 SRLQ86TD4 932 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 SLC17A8Q8NDX2 589 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 CCDC26Q8TAB7 109 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 ARHGEF26Q96DR7 871 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 CAMKK2Q96RR4 588 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 IWS1Q96ST2 819 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 UBE2TQ9NPD8 197 aaPredicted RBP20.17■□□□□ 0.82
COPS7A-215ENST00000543155 ASTN2O75129 1339 aaPredicted RBP20.17■□□□□ 0.82
COPS7A-215ENST00000543155 A6NNZ2 444 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 DDX3YO15523 660 aaKnown RBP20.17■□□□□ 0.82
COPS7A-215ENST00000543155 DPEP1P16444 411 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 KCNA3P22001 575 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 SPP2Q13103 211 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 PGM5Q15124 567 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 TUBB8Q3ZCM7 444 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 ARHGEF19Q8IW93 802 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 C4orf19Q8IY42 314 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 THAP2Q9H0W7 228 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 GINM1Q9NU53 330 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 PPP1R9AQ9ULJ8 1098 aa20.17■□□□□ 0.82
COPS7A-215ENST00000543155 RRP15Q9Y3B9 282 aaKnown RBP20.17■□□□□ 0.82
COPS7A-215ENST00000543155 KRT14P02533 472 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 EIF2AK2P19525 551 aaKnown RBP20.16■□□□□ 0.82
COPS7A-215ENST00000543155 JAK3P52333 1124 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 HADHBP55084 474 aaKnown RBP20.16■□□□□ 0.82
COPS7A-215ENST00000543155 NCKAP1LP55160 1127 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 EN1Q05925 392 aaPredicted RBP20.16■□□□□ 0.82
COPS7A-215ENST00000543155 CXCL9Q07325 125 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 RASA3Q14644 834 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 MAATS1Q7Z4T9 603 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 RHOT2Q8IXI1 618 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 C1orf131Q8NDD1 294 aaKnown RBP20.16■□□□□ 0.82
COPS7A-215ENST00000543155 TAAR1Q96RJ0 339 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 TAS2R14Q9NYV8 317 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 PNMA2Q9UL42 364 aa20.16■□□□□ 0.82
COPS7A-215ENST00000543155 BACH1O14867 736 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 ITGA4P13612 1032 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 GCLMP48507 274 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 C1orf220Q5T0J3 134 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 PALB2Q86YC2 1186 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 LRRC45Q96CN5 670 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 CARD9Q9H257 536 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 PMM2O15305 246 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 SFNP31947 248 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 PSMC5P62195 406 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 RPS6P62753 249 aaKnown RBP20.15■□□□□ 0.82
COPS7A-215ENST00000543155 GNGT1P63211 74 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 UGCGQ16739 394 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 LRIG3Q6UXM1 1119 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 SLC20A1Q8WUM9 679 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 TRERF1Q96PN7 1200 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 RSPH14Q9UHP6 348 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 TCEAL9Q9UHQ7 104 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 USP20Q9Y2K6 914 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
COPS7A-215ENST00000543155 PARP14Q460N5 1801 aa20.15■□□□□ 0.82
COPS7A-215ENST00000543155 PFASO15067 1338 aa20.14■□□□□ 0.82
COPS7A-215ENST00000543155 GRIN2DO15399 1336 aa20.14■□□□□ 0.82
COPS7A-215ENST00000543155 WDR64B1ANS9 1081 aa20.14■□□□□ 0.81
COPS7A-215ENST00000543155 EIF3HO15372 352 aaKnown RBP eCLIP20.14■□□□□ 0.81
COPS7A-215ENST00000543155 MXI1P50539 228 aa20.14■□□□□ 0.81
COPS7A-215ENST00000543155 KRT76Q01546 638 aa20.14■□□□□ 0.81
COPS7A-215ENST00000543155 TCEAL1Q15170 157 aa20.14■□□□□ 0.81
COPS7A-215ENST00000543155 CLUL1Q15846 466 aa20.14■□□□□ 0.81
COPS7A-215ENST00000543155 NAP1L3Q99457 506 aaPredicted RBP20.14■□□□□ 0.81
COPS7A-215ENST00000543155 TSPYL1Q9H0U9 437 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms