RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GAP43P17677 238 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 FGFR4P22455 802 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 EIF4BP23588 611 aaKnown RBP11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 DNM2P50570 870 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 GTF2BQ00403 316 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 KCNB1Q14721 858 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 HERC4Q5GLZ8 1057 aaPredicted RBP11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 ODR4Q5SWX8 454 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 C16orf59Q7L2K0 433 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 FAM228AQ86W67 206 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 MYCT1Q8N699 235 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 SCFD1Q8WVM8 642 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 PPP1R12CQ9BZL4 782 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 LRRC27Q9C0I9 530 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 TMX1Q9H3N1 280 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 TBC1D7Q9P0N9 293 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 MAN1B1Q9UKM7 699 aa11.79□□□□□ -0.52
NPIPB3-210ENST00000542817 ABLIM1O14639 778 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 B4GALT5O43286 388 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 TRAK2O60296 914 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 TBCAO75347 108 aaKnown RBP11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 IDEP14735 1019 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 EPHB4P54760 987 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 CCL23P55773 120 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 BFSP2Q13515 415 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 MORC3Q14149 939 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 SCN5AQ14524 2016 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 LTBP2Q14767 1821 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 ZC2HC1CQ53FD0 456 aaPredicted RBP11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 CCDC65Q8IXS2 484 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 SMYD4Q8IYR2 804 aaPredicted RBP11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 C7orf61Q8IZ16 206 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 TANC1Q9C0D5 1861 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 NUP62CLQ9H1M0 184 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 TMEM134Q9H6X4 195 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 ERVK-5Q9HDB9 667 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 SEL1LQ9UBV2 794 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 GDAQ9Y2T3 454 aa11.78□□□□□ -0.52
NPIPB3-210ENST00000542817 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 LRRIQ4A6NIV6 560 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 MGEA5O60502 916 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 RPLP2P05387 115 aaKnown RBP11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 GHRP10912 638 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 CDC42EP1Q00587 391 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 FAM187BQ17R55 369 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 BMT2Q1RMZ1 405 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 PLEKHG4Q58EX7 1191 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 FAM26FQ5R3K3 315 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 MFSD5Q6N075 450 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 CAVIN1Q6NZI2 390 aaKnown RBP11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 SLC39A4Q6P5W5 647 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 HAUS6Q7Z4H7 955 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 RSPH3Q86UC2 560 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 FAM178BQ8IXR5 827 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 ZNF507Q8TCN5 953 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 LINC01599Q8WXQ3 324 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 IFT74Q96LB3 600 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 HTATIP2Q9BUP3 242 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 HAPLN2Q9GZV7 340 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 ZHX3Q9H4I2 956 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 SLC39A2Q9NP94 309 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 KMT5AQ9NQR1 393 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 LARSQ9P2J5 1176 aaKnown RBP11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 GINS2Q9Y248 185 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 SQORQ9Y6N5 450 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 MYH11P35749 1972 aa11.77□□□□□ -0.53
NPIPB3-210ENST00000542817 CDH23Q9H251 3354 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 DENND3A2RUS2 1198 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 CCDC169A6NNP5 214 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 TISP43B9A030 160 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 EVI5O60447 810 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 TSPAN1O60635 241 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 CSF2RAP15509 400 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 SYN1P17600 705 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 CD52P31358 61 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 TFDP1Q14186 410 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 DSC3Q14574 896 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 PPP2R5AQ15172 486 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 CCDC183Q5T5S1 534 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 ISM2Q6H9L7 571 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 TSHZ1Q6ZSZ6 1077 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 SRGAP1Q7Z6B7 1085 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 DEPTORQ8TB45 409 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 SMARCE1Q969G3 411 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 MED15Q96RN5 788 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 GCOM2Q9BZD3 368 aaPredicted RBP11.76□□□□□ -0.53
NPIPB3-210ENST00000542817 MRPL44Q9H9J2 332 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms