RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 KCTD10Q9H3F6 313 aa4.35□□□□□ -1.71
USP28-210ENST00000542033 C12orf65Q9H3J6 166 aaKnown RBP4.35□□□□□ -1.71
USP28-210ENST00000542033 HOMER2Q9NSB8 354 aa4.35□□□□□ -1.71
USP28-210ENST00000542033 OAZ3Q9UMX2 235 aa4.35□□□□□ -1.71
USP28-210ENST00000542033 EDARQ9UNE0 448 aa4.35□□□□□ -1.71
USP28-210ENST00000542033 TCAF1Q9Y4C2 921 aa4.35□□□□□ -1.71
USP28-210ENST00000542033 K7ESF4 209 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 GPR42O15529 346 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 KATNA1O75449 491 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 MTHFD2P13995 350 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 CR2P20023 1033 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 RPS19P39019 145 aaKnown RBP4.34□□□□□ -1.71
USP28-210ENST00000542033 LGALS4P56470 323 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 KLF1Q13351 362 aaPredicted RBP4.34□□□□□ -1.71
USP28-210ENST00000542033 SPIDRQ14159 915 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 RNF151Q2KHN1 245 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 PITRM1Q5JRX3 1037 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 GLB1L2Q8IW92 636 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 CMIPQ8IY22 773 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 OR14K1Q8NGZ2 314 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 NKD2Q969F2 451 aaPredicted RBP4.34□□□□□ -1.71
USP28-210ENST00000542033 UIMC1Q96RL1 719 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 CDK5RAP1Q96SZ6 601 aaKnown RBP4.34□□□□□ -1.71
USP28-210ENST00000542033 GPR20Q99678 358 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 OSBPL6Q9BZF3 934 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 QRSL1Q9H0R6 528 aaKnown RBP4.34□□□□□ -1.71
USP28-210ENST00000542033 DEF6Q9H4E7 631 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 PRSS50Q9UI38 385 aa4.34□□□□□ -1.71
USP28-210ENST00000542033 CTDP1Q9Y5B0 961 aaPredicted RBP4.34□□□□□ -1.71
USP28-210ENST00000542033 RBM8AQ9Y5S9 174 aaKnown RBP4.34□□□□□ -1.71
USP28-210ENST00000542033 PATE3B3GLJ2 98 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 CDC14BO60729 498 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 CFBP00751 764 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 HNRNPLP14866 589 aaKnown RBP eCLIP4.33□□□□□ -1.72
USP28-210ENST00000542033 ERVK-21P61565 698 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 ADAM17P78536 824 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 MTMR1Q13613 665 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 TRIM25Q14258 630 aaKnown RBP4.33□□□□□ -1.72
USP28-210ENST00000542033 CLUL1Q15846 466 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 SYDE2Q5VT97 1194 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 KRT40Q6A162 431 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 TAX1BP1Q86VP1 789 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 PLA2G15Q8NCC3 412 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 AUTS2Q8WXX7 1259 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 DVL3Q92997 716 aaPredicted RBP4.33□□□□□ -1.72
USP28-210ENST00000542033 SLC7A6OSQ96CW6 309 aaPredicted RBP4.33□□□□□ -1.72
USP28-210ENST00000542033 C8orf49Q96NF6 230 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 PTPN18Q99952 460 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 NELFAQ9H3P2 528 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 DNAJC28Q9NX36 388 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 DPP7Q9UHL4 492 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 TRHDEQ9UKU6 1024 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 TMPRSS11EQ9UL52 423 aa4.33□□□□□ -1.72
USP28-210ENST00000542033 ZFR2Q9UPR6 939 aaKnown RBP4.33□□□□□ -1.72
USP28-210ENST00000542033 WASHC2CQ9Y4E1 1318 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 PMS2P1A4D2B8 440 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 C2orf78A6NCI8 922 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 MARCH6O60337 910 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 ZNF623O75123 536 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 CENPBP07199 599 aaPredicted RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 MYBL2P10244 700 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 GPR3P46089 330 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 SELENOPP49908 381 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 MRPS9P82933 396 aaKnown RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 ATP2C1P98194 919 aaPredicted RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 CDK17Q00537 523 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 MGAT5Q09328 741 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 TCIRG1Q13488 830 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 ICAM4Q14773 271 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 TBR1Q16650 682 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 TOR2AQ5JU69 321 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 PGM2L1Q6PCE3 622 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 DBX2Q6ZNG2 339 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 GAREM2Q75VX8 874 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 CLEC14AQ86T13 490 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 LYSMD2Q8IV50 215 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 FAM9AQ8IZU1 332 aaPredicted RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 DNERQ8NFT8 737 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 GNRHR2Q96P88 292 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 C1QTNF3Q9BXJ4 246 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 TRIM8Q9BZR9 551 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 SLC6A15Q9H2J7 730 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 C14orf93Q9H972 538 aaKnown RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 CCM2LQ9NUG4 571 aaPredicted RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.32□□□□□ -1.72
USP28-210ENST00000542033 MKS1Q9NXB0 559 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 EVLQ9UI08 416 aaPredicted RBP4.32□□□□□ -1.72
USP28-210ENST00000542033 ZBTB21Q9ULJ3 1066 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 CDY2AQ9Y6F7 541 aa4.32□□□□□ -1.72
USP28-210ENST00000542033 SLC26A4O43511 780 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 RAD17O75943 681 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 SEC24DO94855 1032 aaPredicted RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 LY86O95711 162 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 MT-CO1P00395 513 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 GAAP10253 952 aa4.31□□□□□ -1.72
USP28-210ENST00000542033 IARSP41252 1262 aaKnown RBP4.31□□□□□ -1.72
USP28-210ENST00000542033 SLC5A3P53794 718 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms