RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TOX4O94842 621 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 COMTP21964 271 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 XPAP23025 273 aaPredicted RBP8.42□□□□□ -1.06
YBX3-210ENST00000540975 TMPRSS15P98073 1019 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 FOXL1Q12952 345 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 TRIM25Q14258 630 aaKnown RBP8.42□□□□□ -1.06
YBX3-210ENST00000540975 GRM7Q14831 915 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 GAGE13Q4V321 117 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 HS1BP3Q53T59 392 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 PITRM1Q5JRX3 1037 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 Q6ZSN1 163 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 UIMC1Q96RL1 719 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 FDXACB1Q9BRP7 624 aaPredicted RBP8.42□□□□□ -1.06
YBX3-210ENST00000540975 TCAF1Q9Y4C2 921 aa8.42□□□□□ -1.06
YBX3-210ENST00000540975 SEC24DO94855 1032 aaPredicted RBP8.41□□□□□ -1.06
YBX3-210ENST00000540975 VSIG10L2P0DP72 767 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 FAPQ12884 760 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 CCDC178Q5BJE1 867 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 RNF187Q5TA31 235 aaPredicted RBP8.41□□□□□ -1.06
YBX3-210ENST00000540975 GAREM2Q75VX8 874 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 POLNQ7Z5Q5 900 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 CMIPQ8IY22 773 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 ATL2Q8NHH9 583 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 EAF2Q96CJ1 260 aaPredicted RBP8.41□□□□□ -1.06
YBX3-210ENST00000540975 GPR20Q99678 358 aa8.41□□□□□ -1.06
YBX3-210ENST00000540975 PHLDB1Q86UU1 1377 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 GOLGA8AA7E2F4 631 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 LY86O95711 162 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 JUNP05412 331 aaKnown RBP8.4□□□□□ -1.06
YBX3-210ENST00000540975 LPLP06858 475 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 CDSNQ15517 529 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 FSCN1Q16658 493 aaKnown RBP8.4□□□□□ -1.06
YBX3-210ENST00000540975 UGT8Q16880 541 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 RNF219Q5W0B1 726 aaPredicted RBP8.4□□□□□ -1.06
YBX3-210ENST00000540975 ADGRE4PQ86SQ3 457 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 PIK3C3Q8NEB9 887 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 TMEM176AQ96HP8 235 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 ACAP3Q96P50 834 aa8.4□□□□□ -1.06
YBX3-210ENST00000540975 C14orf93Q9H972 538 aaKnown RBP8.4□□□□□ -1.06
YBX3-210ENST00000540975 EVLQ9UI08 416 aaPredicted RBP8.4□□□□□ -1.06
YBX3-210ENST00000540975 UBE2QL1A1L167 161 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 NRP2O60462 931 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 MSX2P35548 267 aaPredicted RBP8.39□□□□□ -1.07
YBX3-210ENST00000540975 SELENOPP49908 381 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 LGALS4P56470 323 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 PPARAQ07869 468 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 R3HDM1Q15032 1099 aaKnown RBP8.39□□□□□ -1.07
YBX3-210ENST00000540975 KRT40Q6A162 431 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 MAMDC4Q6UXC1 1216 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 DDX42Q86XP3 938 aaKnown RBP eCLIP8.39□□□□□ -1.07
YBX3-210ENST00000540975 UNC5BQ8IZJ1 945 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 OR14C36Q8NHC7 312 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 LMBR1Q8WVP7 490 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 EDAQ92838 391 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 CDK5RAP1Q96SZ6 601 aaKnown RBP8.39□□□□□ -1.07
YBX3-210ENST00000540975 ING3Q9NXR8 418 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 TSC22D4Q9Y3Q8 395 aa8.39□□□□□ -1.07
YBX3-210ENST00000540975 C1QTNF3-AMACRE9PGA6 284 aa8.38□□□□□ -1.07
YBX3-210ENST00000540975 ACO1P21399 889 aaKnown RBP8.38□□□□□ -1.07
YBX3-210ENST00000540975 ENPP1P22413 925 aa8.38□□□□□ -1.07
YBX3-210ENST00000540975 SPATS2Q86XZ4 545 aaKnown RBP8.38□□□□□ -1.07
YBX3-210ENST00000540975 ADOQ96SZ5 270 aa8.38□□□□□ -1.07
YBX3-210ENST00000540975 KCTD10Q9H3F6 313 aa8.38□□□□□ -1.07
YBX3-210ENST00000540975 IL23AQ9NPF7 189 aa8.38□□□□□ -1.07
YBX3-210ENST00000540975 TESMINQ9Y4I5 508 aa8.38□□□□□ -1.07
YBX3-210ENST00000540975 A0A1W2PR48 441 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 PRKD3O94806 890 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 NRG3P56975 720 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 SCAND1P57086 179 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 MGAT5Q09328 741 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 LMBR1LQ6UX01 489 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 TAS1R1Q7RTX1 841 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 CMTM4Q8IZR5 234 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 AHCYL2Q96HN2 611 aaKnown RBP8.37□□□□□ -1.07
YBX3-210ENST00000540975 KRTAP9-3Q9BYQ3 159 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 MCM8Q9UJA3 840 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 RCAN3Q9UKA8 241 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 ATP8A1Q9Y2Q0 1164 aa8.37□□□□□ -1.07
YBX3-210ENST00000540975 MUSKO15146 869 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 MTSS1O43312 755 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 ALDH1A2O94788 518 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 INSRRP14616 1297 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 PRKD1Q15139 912 aaPredicted RBP8.36□□□□□ -1.07
YBX3-210ENST00000540975 ZXDCQ2QGD7 858 aaPredicted RBP8.36□□□□□ -1.07
YBX3-210ENST00000540975 FAM111BQ6SJ93 734 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 PALM2Q8IXS6 379 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 D2HGDHQ8N465 521 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 COG1Q8WTW3 980 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 TGFBRAP1Q8WUH2 860 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 FAM89AQ96GI7 184 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 RAX2Q96IS3 184 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 ORAI2Q96SN7 254 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 MPHOSPH9Q99550 1183 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 TCF25Q9BQ70 676 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 C14orf119Q9NWQ9 140 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 NCDNQ9UBB6 729 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 MYRFQ9Y2G1 1151 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 SH3BP1Q9Y3L3 701 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms