RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 HVCN1Q96D96 273 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 OSMRQ99650 979 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 FDXACB1Q9BRP7 624 aaPredicted RBP19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 KMT5AQ9NQR1 393 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 OLFML3Q9NRN5 406 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 DACT1Q9NYF0 836 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 SERTAD1Q9UHV2 236 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 TANC1Q9C0D5 1861 aa19.33■□□□□ 0.68
CLSTN3-210ENST00000540931 MYMKA6NI61 221 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 CCDC169A6NNP5 214 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 K7ERI5 159 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 TRAK2O60296 914 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 ERLIN2O94905 339 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 KIF20AO95235 890 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 SMC2O95347 1197 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 FGBP02675 491 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 SKIP12755 728 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 CSF2RAP15509 400 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 ASIC1P78348 528 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 TMEM62Q0P6H9 643 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 DRP2Q13474 957 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 CAPSQ13938 189 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 FAM187BQ17R55 369 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 FAM178BQ8IXR5 827 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 RSPH1Q8WYR4 309 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 ZBTB10Q96DT7 871 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 CCDC51Q96ER9 411 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 PAGE5Q96GU1 130 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 ST6GALNAC4Q9H4F1 302 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 IFT122Q9HBG6 1241 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 PANK4Q9NVE7 773 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 RMND1Q9NWS8 449 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 PCDHB13Q9Y5F0 798 aa19.32■□□□□ 0.68
CLSTN3-210ENST00000540931 FRMD3A2A2Y4 597 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 IDEP14735 1019 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 NPTX2P47972 431 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 PEX3P56589 373 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 STRN3Q13033 797 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 MAPK7Q13164 816 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 SNW1Q13573 536 aaKnown RBP19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 LPIN1Q14693 890 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 PPP4R3CPQ6ZMV5 832 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 UNC13DQ70J99 1090 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 DYMQ7RTS9 669 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 CATSPER4Q7RTX7 472 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 ASAP3Q8TDY4 903 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 DNAJC19Q96DA6 116 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 SCLYQ96I15 445 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 GOLPH3LQ9H4A5 285 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 GPRC5CQ9NQ84 441 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 C1orf112Q9NSG2 853 aa19.31■□□□□ 0.68
CLSTN3-210ENST00000540931 UMODL1Q5DID0 1318 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 UNC80Q8N2C7 3258 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 INO80B-WBP1J3KQ70 363 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 NBNO60934 754 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 GHRP10912 638 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 MDM2Q00987 491 aaPredicted RBP19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 HSP90AA2PQ14568 343 aaPredicted RBP19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 HERC4Q5GLZ8 1057 aaPredicted RBP19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 DAW1Q8N136 415 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 ZHX3Q9H4I2 956 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 ARHGAP28Q9P2N2 729 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 PADI3Q9ULW8 664 aa19.3■□□□□ 0.68
CLSTN3-210ENST00000540931 ITGB8P26012 769 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 AFMP43652 599 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 NCKAP1LP55160 1127 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 RAD51AP2Q09MP3 1159 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 NFX1Q12986 1120 aaKnown RBP19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 POSTNQ15063 836 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 FAM109BQ6ICB4 259 aaPredicted RBP19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 DEFB128Q7Z7B8 93 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 LRRC15Q8TF66 581 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 GSDMAQ96QA5 445 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 TRAIPQ9BWF2 469 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 LMBRD1Q9NUN5 540 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 ST3GAL5Q9UNP4 418 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 EXOC7Q9UPT5 735 aa19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 NOC2LQ9Y3T9 749 aaKnown RBP19.29■□□□□ 0.68
CLSTN3-210ENST00000540931 LTBP2Q14767 1821 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 ACKR2O00590 384 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 NR1I2O75469 434 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 KCNJ6P48051 423 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 RAB27AP51159 221 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 MBTPS1Q14703 1052 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 KCNB1Q14721 858 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 NOTUMQ6P988 496 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 KSR1Q8IVT5 923 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 HACE1Q8IYU2 909 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 DBF4BQ8NFT6 615 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 PHOSPHO2Q8TCD6 241 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 HERVK_113Q902F9 699 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 COL25A1Q9BXS0 654 aaPredicted RBP19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 FZD8Q9H461 694 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 MRPL44Q9H9J2 332 aaKnown RBP19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 ERVK-5Q9HDB9 667 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 EXOC1Q9NV70 894 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 MYH11P35749 1972 aa19.28■□□□□ 0.68
CLSTN3-210ENST00000540931 GADD45BO75293 160 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms