RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 TPH2Q8IWU9 490 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 GLG1Q92896 1179 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 XPO6Q96QU8 1125 aaKnown RBP13.3□□□□□ -0.28
NPC1-202ENST00000540608 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 TAS2R14Q9NYV8 317 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 COG5Q9UP83 839 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 PHF20L1A8MW92 1017 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 KIAA0391O15091 583 aaKnown RBP13.29□□□□□ -0.28
NPC1-202ENST00000540608 VCAM1P19320 739 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 IRX3P78415 501 aaPredicted RBP13.29□□□□□ -0.28
NPC1-202ENST00000540608 MAPK7Q13164 816 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 TATDN1Q6P1N9 297 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 TMEM179Q6ZVK1 233 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 STXBP4Q6ZWJ1 553 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 ADAT2Q7Z6V5 191 aaKnown RBP13.29□□□□□ -0.28
NPC1-202ENST00000540608 RHOT2Q8IXI1 618 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 ALG3Q92685 438 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 CHMP6Q96FZ7 201 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 PGM2Q96G03 612 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 DYDC2Q96IM9 177 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 AGPAT1Q99943 283 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 AGPAT3Q9NRZ7 376 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 ALG6Q9Y672 507 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 COL11A2P13942 1736 aaPredicted RBP13.29□□□□□ -0.28
NPC1-202ENST00000540608 CHUKO15111 745 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 NDUFB10O96000 172 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 SHBGP04278 402 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 COPB2P35606 906 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 ZNF131P52739 623 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 ZNF211Q13398 564 aaPredicted RBP13.29□□□□□ -0.28
NPC1-202ENST00000540608 TCEAL1Q15170 157 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 ZDHHC24Q6UX98 284 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 TAX1BP1Q86VP1 789 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 COL23A1Q86Y22 540 aaPredicted RBP13.29□□□□□ -0.28
NPC1-202ENST00000540608 JAMLQ86YT9 394 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 MDM1Q8TC05 714 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 NEK9Q8TD19 979 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 FAM129AQ9BZQ8 928 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 RASAL2Q9UJF2 1139 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 PNMA2Q9UL42 364 aa13.29□□□□□ -0.28
NPC1-202ENST00000540608 CCDC169A6NNP5 214 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
NPC1-202ENST00000540608 BACH1O14867 736 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 TRIM49P0CI25 452 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 TRIM49CP0CI26 452 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 HSPA6P17066 643 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 RFX1P22670 979 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 PTGIRP43119 386 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 CYP2J2P51589 502 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 PLTPP55058 493 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 JAG1P78504 1218 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 MYL7Q01449 175 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 IKQ13123 557 aaPredicted RBP13.28□□□□□ -0.28
NPC1-202ENST00000540608 PPP2R5CQ13362 524 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 ARHGAP44Q17R89 818 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 PODNQ7Z5L7 613 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 FAM178BQ8IXR5 827 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 IDI2Q9BXS1 227 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 KDM4CQ9H3R0 1056 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 GOPCQ9HD26 462 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 SEPT11Q9NVA2 429 aaKnown RBP13.28□□□□□ -0.28
NPC1-202ENST00000540608 SNX24Q9Y343 169 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 MIF4GDA9UHW6 222 aaKnown RBP13.28□□□□□ -0.28
NPC1-202ENST00000540608 ZBTB39O15060 712 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 PHF2O75151 1096 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 PSMD10O75832 226 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 CHRNA3P32297 505 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 SPRED3Q2MJR0 410 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 DENND2CQ68D51 928 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 SLC9A9Q8IVB4 645 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 LMO3Q8TAP4 145 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 CCT6BQ92526 530 aa13.28□□□□□ -0.28
NPC1-202ENST00000540608 RNF25Q96BH1 459 aaPredicted RBP13.28□□□□□ -0.28
NPC1-202ENST00000540608 CNOT7Q9UIV1 285 aaKnown RBP13.28□□□□□ -0.28
NPC1-202ENST00000540608 GHRP10912 638 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 BMP3P12645 472 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 MUTP22033 750 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 GBP1P32455 592 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 MMP13P45452 471 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 SCTRP47872 440 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 DACT2Q5SW24 774 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 LRCH2Q5VUJ6 765 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 NLGN1Q8N2Q7 840 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 UBL4BQ8N7F7 174 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 SLC5A5Q92911 643 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 MASTLQ96GX5 879 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 MYCBPQ99417 103 aaPredicted RBP13.27□□□□□ -0.28
NPC1-202ENST00000540608 WDR18Q9BV38 432 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 MRIQ9BWK5 157 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 TMOD4Q9NZQ9 345 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 KCND2Q9NZV8 630 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 ODF2LQ9ULJ1 636 aa13.27□□□□□ -0.28
NPC1-202ENST00000540608 SYNGAP1Q96PV0 1343 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms