RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ZNF174Q15697 407 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 KCNT2Q6UVM3 1135 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 LRRC55Q6ZSA7 311 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 SRGAP1Q7Z6B7 1085 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 ADGRD2Q7Z7M1 963 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 GJD3Q8N144 294 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 RNF149Q8NC42 400 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 MSLNLQ96KJ4 702 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 LRFN3Q9BTN0 628 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 IFT122Q9HBG6 1241 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 TLR9Q9NR96 1032 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 PRKAG3Q9UGI9 489 aa10.05□□□□□ -0.8
LMO3-222ENST00000540445 POTEMA6NI47 508 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 PER2O15055 1255 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 ST18O60284 1047 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 GPR37L1O60883 481 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 CA8P35219 290 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 PBX3P40426 434 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 PHKA2P46019 1235 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 RBM25P49756 843 aaKnown RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 ERVFC1P60507 584 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 RNASELQ05823 741 aaKnown RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 ZP2Q05996 745 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 TFDP1Q14186 410 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 MXD4Q14582 209 aaPredicted RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 CLLU1OSQ5K130 101 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 ZNF598Q86UK7 904 aaKnown RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 FERMT3Q86UX7 667 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 LRRC43Q8N309 656 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 FBXO18Q8NFZ0 1043 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 PIGOQ8TEQ8 1089 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 LPPQ93052 612 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 PGBD4Q96DM1 585 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 ZNF558Q96NG5 402 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 MTMR9Q96QG7 549 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 KIF2CQ99661 725 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 MRPL9Q9BYD2 267 aaKnown RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 FOXP1Q9H334 677 aaPredicted RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 UPF2Q9HAU5 1272 aaKnown RBP10.04□□□□□ -0.8
LMO3-222ENST00000540445 ENTPD7Q9NQZ7 604 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 ANKEF1Q9NU02 776 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 FAM105AQ9NUU6 356 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 SPG21Q9NZD8 308 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 PCDHGC5Q9Y5F6 944 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 TRIP11Q15643 1979 aa10.04□□□□□ -0.8
LMO3-222ENST00000540445 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 FSCN2O14926 492 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 DGAT1O75907 488 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 ERLIN2O94905 339 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 EYA4O95677 639 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 GLP2RO95838 553 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 XRCC6P12956 609 aaKnown RBP eCLIP10.03□□□□□ -0.8
LMO3-222ENST00000540445 ATF7P17544 494 aaPredicted RBP10.03□□□□□ -0.8
LMO3-222ENST00000540445 PPM1AP35813 382 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 RAB27AP51159 221 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 BCAR1P56945 870 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 PLCB3Q01970 1234 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 SMAD4Q13485 552 aaKnown RBP10.03□□□□□ -0.8
LMO3-222ENST00000540445 RABEP1Q15276 862 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 SMAD2Q15796 467 aaKnown RBP10.03□□□□□ -0.8
LMO3-222ENST00000540445 PLPP4Q5VZY2 271 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 GLB1LQ6UWU2 654 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 MAEAQ7L5Y9 396 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 TMC7Q7Z402 723 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 ADHFE1Q8IWW8 467 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 EFHBQ8N7U6 833 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 ERMNQ8TAM6 284 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 MRPS27Q92552 414 aaKnown RBP10.03□□□□□ -0.8
LMO3-222ENST00000540445 FAM193BQ96PV7 902 aaPredicted RBP10.03□□□□□ -0.8
LMO3-222ENST00000540445 TCF25Q9BQ70 676 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 TRAIPQ9BWF2 469 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 CLEC1BQ9P126 229 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 CD207Q9UJ71 328 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
LMO3-222ENST00000540445 PCDHB2Q9Y5E7 798 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 MYO10Q9HD67 2058 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 ZNF318Q5VUA4 2279 aa10.03□□□□□ -0.8
LMO3-222ENST00000540445 TECTAO75443 2155 aa10.02□□□□□ -0.8
LMO3-222ENST00000540445 INO80B-WBP1J3KQ70 363 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 ZNF623O75123 536 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 ZC3H11AO75152 810 aaKnown RBP eCLIP10.02□□□□□ -0.81
LMO3-222ENST00000540445 OFD1O75665 1012 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 LYPLA2O95372 231 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 OR52Z1P0C646 297 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 NOMO2Q5JPE7 1267 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 TMEM31Q5JXX7 168 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 TTC38Q5R3I4 469 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 MCTP1Q6DN14 999 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 CATSPER3Q86XQ3 398 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 NOSTRINQ8IVI9 506 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 URGCPQ8TCY9 931 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 TMEM169Q96HH4 297 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 NACC1Q96RE7 527 aa10.02□□□□□ -0.81
LMO3-222ENST00000540445 GBP3Q9H0R5 595 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms