RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 TRAIPQ9BWF2 469 aa14.86□□□□□ -0.03
PRPF19-204ENST00000539960 ELAC1Q9H777 363 aaKnown RBP14.86□□□□□ -0.03
PRPF19-204ENST00000539960 MTMR10Q9NXD2 777 aa14.86□□□□□ -0.03
PRPF19-204ENST00000539960 STK17AQ9UEE5 414 aa14.86□□□□□ -0.03
PRPF19-204ENST00000539960 LRFN2Q9ULH4 789 aa14.86□□□□□ -0.03
PRPF19-204ENST00000539960 PCDHA7Q9UN72 937 aa14.86□□□□□ -0.03
PRPF19-204ENST00000539960 A0A0U1RQF3 1178 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 SFI1A8K8P3 1242 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 ERLIN2O94905 339 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 ARHGEF15O94989 841 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 KRT85P78386 507 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 MBTD1Q05BQ5 628 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 PPP2R2DQ66LE6 453 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 CDCA2Q69YH5 1023 aaPredicted RBP14.85□□□□□ -0.03
PRPF19-204ENST00000539960 SHC4Q6S5L8 630 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 CCDC73Q6ZRK6 1079 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 GPBP1Q86WP2 473 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 ECHDC2Q86YB7 292 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 ZBTB8OSQ8IWT0 167 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 DEPTORQ8TB45 409 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
PRPF19-204ENST00000539960 LARP4BQ92615 738 aaKnown RBP14.85□□□□□ -0.03
PRPF19-204ENST00000539960 ZNF689Q96CS4 500 aaPredicted RBP14.85□□□□□ -0.03
PRPF19-204ENST00000539960 CHAMP1Q96JM3 812 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 FAM161BQ96MY7 647 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 C2orf40Q9H1Z8 148 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 C17orf75Q9HAS0 396 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 AGPAT5Q9NUQ2 364 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 TMEM161AQ9NX61 479 aa14.85□□□□□ -0.03
PRPF19-204ENST00000539960 PIN4Q9Y237 131 aaKnown RBP14.85□□□□□ -0.03
PRPF19-204ENST00000539960 LOXHD1Q8IVV2 1947 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 MICAL3Q7RTP6 2002 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 A0A087X0B3 334 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 NPHP3-ACAD11A0A0J9YXS1 232 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 ZNF623O75123 536 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 EOMESO95936 686 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 SKIP12755 728 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
PRPF19-204ENST00000539960 IBSPP21815 317 aaPredicted RBP14.84□□□□□ -0.03
PRPF19-204ENST00000539960 AXLP30530 894 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 ANP32AP39687 249 aaKnown RBP14.84□□□□□ -0.03
PRPF19-204ENST00000539960 NPTX2P47972 431 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 EFNA5P52803 228 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 PEX3P56589 373 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 RAD51AP2Q09MP3 1159 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 GRIN2CQ14957 1233 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 AMHR2Q16671 573 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 NAALADL2Q58DX5 795 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 TWF2Q6IBS0 349 aaKnown RBP14.84□□□□□ -0.03
PRPF19-204ENST00000539960 LEO1Q8WVC0 666 aaPredicted RBP14.84□□□□□ -0.03
PRPF19-204ENST00000539960 NTPCRQ9BSD7 190 aaKnown RBP14.84□□□□□ -0.03
PRPF19-204ENST00000539960 FZD8Q9H461 694 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 KCNG1Q9UIX4 513 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 ARID2Q68CP9 1835 aa14.84□□□□□ -0.03
PRPF19-204ENST00000539960 CHD9Q3L8U1 2897 aa14.83□□□□□ -0.03
PRPF19-204ENST00000539960 TTC3P53804 2025 aa14.83□□□□□ -0.03
PRPF19-204ENST00000539960 LINC01553A4QN01 128 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 CCDC169A6NNP5 214 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 TSPAN1O60635 241 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 PLS3P13797 630 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 GIT2Q14161 759 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 FAM187BQ17R55 369 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 SV2BQ7L1I2 683 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 ZNF598Q86UK7 904 aaKnown RBP14.83□□□□□ -0.04
PRPF19-204ENST00000539960 PDILTQ8N807 584 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 SPATA32Q96LK8 384 aa14.83□□□□□ -0.04
PRPF19-204ENST00000539960 SCAND2PQ9GZW5 306 aaPredicted RBP14.83□□□□□ -0.04
PRPF19-204ENST00000539960 RC3H2Q9HBD1 1191 aaKnown RBP14.83□□□□□ -0.04
PRPF19-204ENST00000539960 PRMT7Q9NVM4 692 aaPredicted RBP14.83□□□□□ -0.04
PRPF19-204ENST00000539960 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
PRPF19-204ENST00000539960 K7ERI5 159 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 ACKR2O00590 384 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 ARF4P18085 180 aaPredicted RBP14.82□□□□□ -0.04
PRPF19-204ENST00000539960 STAT6P42226 847 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 ERVK-21P61565 698 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 DMP1Q13316 513 aaPredicted RBP14.82□□□□□ -0.04
PRPF19-204ENST00000539960 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
PRPF19-204ENST00000539960 MAPK6Q16659 721 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 UBXN11Q5T124 520 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 ADALQ6DHV7 355 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 NOTUMQ6P988 496 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 FIBCD1Q8N539 461 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 SPIRE2Q8WWL2 714 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 CCDC51Q96ER9 411 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 CPB2Q96IY4 423 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 PRIMPOLQ96LW4 560 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 TGS1Q96RS0 853 aaKnown RBP14.82□□□□□ -0.04
PRPF19-204ENST00000539960 CDX2Q99626 313 aaPredicted RBP14.82□□□□□ -0.04
PRPF19-204ENST00000539960 REEP2Q9BRK0 252 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 KIFC3Q9BVG8 833 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 CCDC113Q9H0I3 377 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 TMEM134Q9H6X4 195 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 CERS4Q9HA82 394 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 KMT5AQ9NQR1 393 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 FAM105AQ9NUU6 356 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 ODF2LQ9ULJ1 636 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 PCDHB2Q9Y5E7 798 aa14.82□□□□□ -0.04
PRPF19-204ENST00000539960 A0A1B0GUA9 196 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 B4GALT5O43286 388 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms