RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 METTL14Q9HCE5 456 aaKnown RBP21.94■■□□□ 1.1
TMEM260-203ENST00000539559 USP40Q9NVE5 1235 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 DBR1Q9UK59 544 aaKnown RBP21.94■■□□□ 1.1
TMEM260-203ENST00000539559 CCT8L1PA6NM43 557 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 FOXO6A8MYZ6 492 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 KIAA0391O15091 583 aaKnown RBP21.94■■□□□ 1.1
TMEM260-203ENST00000539559 NFIAQ12857 509 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 BORCS6Q96GS4 357 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 PABPC3Q9H361 631 aaKnown RBP21.94■■□□□ 1.1
TMEM260-203ENST00000539559 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.94■■□□□ 1.1
TMEM260-203ENST00000539559 SWAP70Q9UH65 585 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 PTPN22Q9Y2R2 807 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 ZMYM2Q9UBW7 1377 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 RPTORQ8N122 1335 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 TCRBV7S2A1N4TA0A589 114 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 ANKRD63C9JTQ0 380 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 H0YIN7 160 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 VIMP08670 466 aaKnown RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 RPSAP08865 295 aaKnown RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 TMEM253P0C7T8 217 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 RPL21P46778 160 aaKnown RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 FMO5P49326 533 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 ERMNQ8TAM6 284 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 TCP11Q8WWU5 503 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 CD2APQ9Y5K6 639 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 MSH4O15457 936 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 RGS16O15492 202 aaPredicted RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 TNFAIP3P21580 790 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 SCP2P22307 547 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 NPEPPSP55786 919 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 LRRC14Q15048 493 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 SLC15A2Q16348 729 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 DOK7Q18PE1 504 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 LACTB2Q53H82 288 aaPredicted RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 TTC27Q6P3X3 843 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 HOOK3Q86VS8 718 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 RABGAP1Q9Y3P9 1069 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 ATMINO43313 823 aaPredicted RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 NF2P35240 595 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 ELF3P78545 371 aaPredicted RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 XRCC4Q13426 336 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 CCDC25Q86WR0 208 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 MGARPQ8TDB4 240 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 CNOT10Q9H9A5 744 aaKnown RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 GRHL1Q9NZI5 618 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 RGS17Q9UGC6 210 aaPredicted RBP21.93■■□□□ 1.1
TMEM260-203ENST00000539559 INTUQ9ULD6 942 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 ALG6Q9Y672 507 aa21.93■■□□□ 1.1
TMEM260-203ENST00000539559 KIF13BQ9NQT8 1826 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 PPIP5K2O43314 1243 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 PPP1R12BO60237 982 aaPredicted RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 LMNB1P20700 586 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 ELF1P32519 619 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 KCNJ1P48048 391 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 TCP10Q12799 353 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 ACCSLQ4AC99 568 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 RINT1Q6NUQ1 792 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 OTUD6AQ7L8S5 288 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 TPH2Q8IWU9 490 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 CERS5Q8N5B7 392 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 EIF2AK1Q9BQI3 630 aaKnown RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 STK33Q9BYT3 514 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 MLXIPLQ9NP71 852 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 COL11A2P13942 1736 aaPredicted RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 NCANO14594 1321 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 CYP3A7-CYP3A51PA0A087WV96 503 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 GOLGA6L10A0A0M3HER8 536 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 FOXN3O00409 490 aaPredicted RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 EEF2P13639 858 aaKnown RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 VCAM1P19320 739 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 CYP3A7P24462 503 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 EIF3BP55884 814 aaKnown RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 MAPK7Q13164 816 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 WLSQ5T9L3 541 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 STYK1Q6J9G0 422 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 TBC1D1Q86TI0 1168 aaPredicted RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 PNMA8AQ86V59 439 aaPredicted RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 KDM4CQ9H3R0 1056 aa21.92■■□□□ 1.1
TMEM260-203ENST00000539559 INTS9Q9NV88 658 aaKnown RBP21.92■■□□□ 1.1
TMEM260-203ENST00000539559 SLC16A3O15427 465 aaKnown RBP21.91■■□□□ 1.1
TMEM260-203ENST00000539559 CLTAP09496 248 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 MMP13P45452 471 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 IKQ13123 557 aaPredicted RBP21.91■■□□□ 1.1
TMEM260-203ENST00000539559 POTEAQ6S8J7 498 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 PRELID2Q8N945 189 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 POP1Q99575 1024 aaKnown RBP21.91■■□□□ 1.1
TMEM260-203ENST00000539559 INTS2Q9H0H0 1204 aaKnown RBP21.91■■□□□ 1.1
TMEM260-203ENST00000539559 ABCF3Q9NUQ8 709 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 TTC7AQ9ULT0 858 aaPredicted RBP21.91■■□□□ 1.1
TMEM260-203ENST00000539559 PCDHAC2Q9Y5I4 1007 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 FAM13AO94988 1023 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 PSMC2P35998 433 aaKnown RBP21.91■■□□□ 1.1
TMEM260-203ENST00000539559 EN1Q05925 392 aaPredicted RBP21.91■■□□□ 1.1
TMEM260-203ENST00000539559 PHLDB3Q6NSJ2 640 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 BANK1Q8NDB2 785 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 BTBD6Q96KE9 485 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 SYT11Q9BT88 431 aa21.91■■□□□ 1.1
TMEM260-203ENST00000539559 CARD9Q9H257 536 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms