RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 DLL1O00548 723 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 ITGB1P05556 798 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 HOXA11P31270 313 aaPredicted RBP17.39■□□□□ 0.37
CIT-210ENST00000539413 POU5F1BQ06416 359 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 LONRF3Q496Y0 759 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 TIGD5Q53EQ6 642 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 NAALADL2Q58DX5 795 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 KRT79Q5XKE5 535 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 IFNLR1Q8IU57 520 aaPredicted RBP17.39■□□□□ 0.37
CIT-210ENST00000539413 SPPL3Q8TCT6 385 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 ASB2Q96Q27 587 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 MMTAG2Q9BU76 263 aaKnown RBP17.39■□□□□ 0.37
CIT-210ENST00000539413 BHMT2Q9H2M3 363 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 STK24Q9Y6E0 443 aa17.39■□□□□ 0.37
CIT-210ENST00000539413 PRRC2BQ5JSZ5 2229 aaKnown RBP17.38■□□□□ 0.37
CIT-210ENST00000539413 VWA3AA6NCI4 1184 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 MEIS3P2A8K0S8 358 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 TSPAN1O60635 241 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 ERLIN2O94905 339 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 SKIP12755 728 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 CYP11B2P19099 503 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 PDCP20941 246 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 DNAJB1P25685 340 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 RAB27AP51159 221 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 MRPS5P82675 430 aaKnown RBP17.38■□□□□ 0.37
CIT-210ENST00000539413 MBTD1Q05BQ5 628 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 CAMK1Q14012 370 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 TCEAL5Q5H9L2 206 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 TJAP1Q5JTD0 557 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 UBXN11Q5T124 520 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 BRAPQ7Z569 592 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 LRRC43Q8N309 656 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 COLGALT1Q8NBJ5 622 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 HLA-CQ95604 372 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
CIT-210ENST00000539413 NSUN3Q9H649 340 aaKnown RBP17.38■□□□□ 0.37
CIT-210ENST00000539413 AAASQ9NRG9 546 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 COG5Q9UP83 839 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 PCDHB2Q9Y5E7 798 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 PCDHB12Q9Y5F1 795 aa17.38■□□□□ 0.37
CIT-210ENST00000539413 LRRIQ4A6NIV6 560 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 E9PMD0 336 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 ZNF623O75123 536 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 LAG3P18627 525 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 SYT1P21579 422 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 AMHR2Q16671 573 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 POF1BQ8WVV4 589 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 BSNDQ8WZ55 320 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 CPB2Q96IY4 423 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 NFKBIZQ9BYH8 718 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 POLD4Q9HCU8 107 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 MYO9BQ13459 2157 aa17.37■□□□□ 0.37
CIT-210ENST00000539413 FGF18O76093 207 aa17.36■□□□□ 0.37
CIT-210ENST00000539413 PBX3P40426 434 aa17.36■□□□□ 0.37
CIT-210ENST00000539413 PCBP1Q15365 356 aaKnown RBP eCLIP17.36■□□□□ 0.37
CIT-210ENST00000539413 ARL6IP4Q66PJ3 421 aaKnown RBP17.36■□□□□ 0.37
CIT-210ENST00000539413 KCNK18Q7Z418 384 aa17.36■□□□□ 0.37
CIT-210ENST00000539413 THNSL1Q8IYQ7 743 aa17.36■□□□□ 0.37
CIT-210ENST00000539413 SNX21Q969T3 373 aa17.36■□□□□ 0.37
CIT-210ENST00000539413 DNM3Q9UQ16 869 aa17.36■□□□□ 0.37
CIT-210ENST00000539413 ATG2AQ2TAZ0 1938 aa17.36■□□□□ 0.37
CIT-210ENST00000539413 PLXNA4Q9HCM2 1894 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 XIRP2A4UGR9 3374 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 B4GALT5O43286 388 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 OFD1O75665 1012 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 EYA4O95677 639 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 ARF4P18085 180 aaPredicted RBP17.35■□□□□ 0.37
CIT-210ENST00000539413 AXLP30530 894 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 IRS1P35568 1242 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 KCNQ1P51787 676 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 RESTQ13127 1097 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 SF3A1Q15459 793 aaKnown RBP17.35■□□□□ 0.37
CIT-210ENST00000539413 ZRSR1Q15695 479 aaKnown RBP17.35■□□□□ 0.37
CIT-210ENST00000539413 KCNT2Q6UVM3 1135 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 GLB1LQ6UWU2 654 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 AGMOQ6ZNB7 445 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 MRPL10Q7Z7H8 261 aaKnown RBP17.35■□□□□ 0.37
CIT-210ENST00000539413 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 PNMA5Q96PV4 448 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 EIF2AQ9BY44 585 aaKnown RBP17.35■□□□□ 0.37
CIT-210ENST00000539413 MRPL9Q9BYD2 267 aaKnown RBP17.35■□□□□ 0.37
CIT-210ENST00000539413 UBE2ZQ9H832 354 aaPredicted RBP17.35■□□□□ 0.37
CIT-210ENST00000539413 INPP5FQ9Y2H2 1132 aa17.35■□□□□ 0.37
CIT-210ENST00000539413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.34■□□□□ 0.37
CIT-210ENST00000539413 NCBP1Q09161 790 aaKnown RBP17.34■□□□□ 0.37
CIT-210ENST00000539413 CSPP1Q1MSJ5 1256 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 AAK1Q2M2I8 961 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 HYIQ5T013 277 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 CDCA2Q69YH5 1023 aaPredicted RBP17.34■□□□□ 0.37
CIT-210ENST00000539413 FAM173BQ6P4H8 233 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 NOTUMQ6P988 496 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 CDR2LQ86X02 465 aaPredicted RBP17.34■□□□□ 0.37
CIT-210ENST00000539413 ZBTB8OSQ8IWT0 167 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 SMG8Q8ND04 991 aaKnown RBP17.34■□□□□ 0.37
CIT-210ENST00000539413 ZNF558Q96NG5 402 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 PLIN2Q99541 437 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 CSRNP2Q9H175 543 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 PCDHGC5Q9Y5F6 944 aa17.34■□□□□ 0.37
CIT-210ENST00000539413 BMP1P13497 986 aa17.33■□□□□ 0.36
CIT-210ENST00000539413 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms