RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 USP40Q9NVE5 1235 aa6.42□□□□□ -1.38
KNTC1-210ENST00000539013 NYAP2Q9P242 653 aa6.42□□□□□ -1.38
KNTC1-210ENST00000539013 GREB1LQ9C091 1923 aaPredicted RBP6.42□□□□□ -1.38
KNTC1-210ENST00000539013 COL2A1P02458 1487 aaPredicted RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 CYP3A7-CYP3A51PA0A087WV96 503 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 ANO9A1A5B4 782 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 PES1O00541 588 aaKnown RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 TBX3O15119 743 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 DHX15O43143 795 aaKnown RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 FZD6O60353 706 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 GNA14O95837 355 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 PNMA6AP0CW24 399 aaPredicted RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 PTPRAP18433 802 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 CES1P23141 567 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 CYP3A7P24462 503 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 MAPK1P28482 360 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 SHMT1P34896 483 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 ARHGAP25P42331 645 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 TXKP42681 527 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 USP11P51784 963 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 STK4Q13043 487 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 PICALMQ13492 652 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 MAN2A1Q16706 1144 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 TEX35Q5T0J7 233 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 STRIP1Q5VSL9 837 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 ANKRD40Q6AI12 368 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 CDC42EP5Q6NZY7 148 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 KRT27Q7Z3Y8 459 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 NCAPG2Q86XI2 1143 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 SLFN12Q8IYM2 578 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 LRRC47Q8N1G4 583 aaKnown RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 SLC35F6Q8N357 371 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 CERS5Q8N5B7 392 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 KIAA0895Q8NCT3 520 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 GALNT11Q8NCW6 608 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 LRRN4CLQ8ND94 238 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 ACRBPQ8NEB7 543 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 SNX29Q8TEQ0 813 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 WNT8BQ93098 351 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 DMRTB1Q96MA1 342 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 ZDHHC15Q96MV8 337 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 MBOAT7Q96N66 472 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 NOC4LQ9BVI4 516 aaKnown RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 RASSF4Q9H2L5 321 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 KANSL2Q9H9L4 492 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 ARFGAP3Q9NP61 516 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 DDX4Q9NQI0 724 aaKnown RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 ZNF446Q9NWS9 450 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 DCTN4Q9UJW0 460 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 FHOD1Q9Y613 1164 aa6.41□□□□□ -1.38
KNTC1-210ENST00000539013 FRMPD2Q68DX3 1309 aaPredicted RBP6.41□□□□□ -1.38
KNTC1-210ENST00000539013 CTAGE15A4D2H0 777 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 MYMKA6NI61 221 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 B4DLN1 442 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 TM4SF5O14894 197 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 FSCN2O14926 492 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 PLSCR1O15162 318 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 SLC37A4O43826 429 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 USO1O60763 962 aaKnown RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 PHACTR2O75167 634 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 TDP2O95551 362 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 FOSP01100 380 aaPredicted RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 IGLV1-40P01703 118 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CTAGE8P0CG41 777 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CRKP46108 304 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 VAV2P52735 878 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 ARHGAP4P98171 946 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 AMPD2Q01433 879 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CKAP4Q07065 602 aaKnown RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 GPS2Q13227 327 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CCDC96Q2M329 555 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 VWA3BQ502W6 1294 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 MIIPQ5JXC2 388 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 PAPD7Q5XG87 772 aaKnown RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 HAUS3Q68CZ6 603 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 IQCEQ6IPM2 695 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 APOBEC3HQ6NTF7 200 aaKnown RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CC2D1AQ6P1N0 951 aaPredicted RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 WDR59Q6PJI9 974 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CTAGE6Q86UF2 777 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CTAGE4Q8IX94 777 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CCDC65Q8IXS2 484 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 AGGF1Q8N302 714 aaeCLIP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 LRRC15Q8TF66 581 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 RUBCNQ92622 972 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 SYN2Q92777 582 aaPredicted RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 COA7Q96BR5 231 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 PLIN2Q99541 437 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 SLF1Q9BQI6 1058 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 PARD6BQ9BYG5 372 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 LACRTQ9GZZ8 138 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 CPVLQ9H3G5 476 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 NDST4Q9H3R1 872 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 PSTPIP2Q9H939 334 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 TMEM260Q9NX78 707 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 PI4KBQ9UBF8 816 aa6.4□□□□□ -1.38
KNTC1-210ENST00000539013 DDX25Q9UHL0 483 aaKnown RBP6.4□□□□□ -1.38
KNTC1-210ENST00000539013 RAB21Q9UL25 225 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms