RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CCL15-CCL14A0A0B4J2E2 113 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 A0A1W2PQH9 124 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 CCDC69A6NI79 296 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 KIAA1324LA8MWY0 1029 aaPredicted RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 H3BS24 57 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 PRC1O43663 620 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 NMT2O60551 498 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 PRNPP04156 253 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 TOP1P11387 765 aaKnown RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 USP14P54578 494 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 HMGCS2P54868 508 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 BACE1P56817 501 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 INHBEP58166 350 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 RNF4P78317 190 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 JAG1P78504 1218 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 PABPC4Q13310 644 aaKnown RBP eCLIP5□□□□□ -1.61
SNHG1-208ENST00000538266 CCL15Q16663 113 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 CCDC96Q2M329 555 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 IFIT1BQ5T764 474 aaKnown RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 OTUD7BQ6GQQ9 843 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 NFXL1Q6ZNB6 911 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 GADL1Q6ZQY3 521 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 STOX1Q6ZVD7 989 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 CHST3Q7LGC8 479 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 DGKHQ86XP1 1220 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 MCF2L2Q86YR7 1114 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 LRRC47Q8N1G4 583 aaKnown RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 TMTC2Q8N394 836 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 FAM169BQ8N8A8 192 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 PIWIL2Q8TC59 973 aaKnown RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 BCL7CQ8WUZ0 217 aaPredicted RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 ASB11Q8WXH4 323 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 UBE2FQ969M7 185 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 MISP3Q96FF7 219 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 TTC14Q96N46 770 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 ASPNQ9BXN1 380 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 C22orf23Q9BZE7 217 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 TANGO6Q9C0B7 1094 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 KIAA1683Q9H0B3 1180 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 DUSP15Q9H1R2 295 aaPredicted RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 IL17RBQ9NRM6 502 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 TCP11L1Q9NUJ3 509 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 NYAP2Q9P242 653 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 SUCOQ9UBS9 1254 aaKnown RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 CLIP2Q9UDT6 1046 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 NAP1L2Q9ULW6 460 aaPredicted RBP5□□□□□ -1.61
SNHG1-208ENST00000538266 AFG3L2Q9Y4W6 797 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 SNX14Q9Y5W7 946 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 ST14Q9Y5Y6 855 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 SLC12A7Q9Y666 1083 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 CYP46A1Q9Y6A2 500 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 TAF6LQ9Y6J9 622 aa5□□□□□ -1.61
SNHG1-208ENST00000538266 WDR19Q8NEZ3 1342 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 MYH4Q9Y623 1939 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 THSD7BQ9C0I4 1608 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 IGKV6D-41A0A0C4DH26 115 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 A0A0G2JLL6 359 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 ADAMTS4O75173 837 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 TP53P04637 393 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 VCAM1P19320 739 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 ATP2B1P20020 1258 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 RPS6KB1P23443 525 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 KIF5BP33176 963 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 GUCY1A2P33402 732 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 MAP2K2P36507 400 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 SLC1A4P43007 532 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 CLCN7P51798 805 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 IRX3P78415 501 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 KIF23Q02241 960 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 IKQ13123 557 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 WTAPQ15007 396 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 ADCK5Q3MIX3 580 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 SYNE3Q6ZMZ3 975 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 RUFY3Q7L099 469 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 CYB5R4Q7L1T6 521 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 SPRED2Q7Z698 418 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 PRRT2Q7Z6L0 340 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 CATIPQ7Z7H3 387 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 CCDC144CPQ8IYA2 1237 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 MB21D2Q8IYB1 491 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 SPICE1Q8N0Z3 855 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 ENAHQ8N8S7 591 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 DTWD2Q8NBA8 298 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 GMCL1P1Q8NEA9 526 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 ACER1Q8TDN7 264 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 SMCR8Q8TEV9 937 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 PARK7Q99497 189 aaKnown RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 MTA3Q9BTC8 594 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 UPF3BQ9BZI7 483 aaKnown RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 TM6SF1Q9BZW5 370 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 MKRN2Q9H000 416 aaKnown RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 ASCC2Q9H1I8 757 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-208ENST00000538266 VCPKMTQ9H867 229 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 SEMA3GQ9NS98 782 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 FBXL21Q9UKT6 434 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 AGTPBP1Q9UPW5 1226 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 TMX2Q9Y320 296 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 PHIPQ8WWQ0 1821 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 PTPRFP10586 1907 aa4.99□□□□□ -1.61
SNHG1-208ENST00000538266 LOC285556D6RIA3 1793 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms