RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 VEZTQ9HBM0 779 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.13□□□□□ -0.318e-9■■■■■ 27.8
CPSF7-218ENST00000537641 SAMD15Q9P1V8 674 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 PPP1R9AQ9ULJ8 1098 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 ZMYM2Q9UBW7 1377 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 PSME4Q14997 1843 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 H0YIN7 160 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 PODXLO00592 558 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 RGS16O15492 202 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-218ENST00000537641 ALAS1P13196 640 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 VCAM1P19320 739 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 PTGIRP43119 386 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 FMO5P49326 533 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 PSMC6P62333 389 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 ELF3P78545 371 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-218ENST00000537641 ARHGAP4P98171 946 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 RIPK1Q13546 671 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-218ENST00000537641 SLMAPQ14BN4 828 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 DACT2Q5SW24 774 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 CCDC63Q8NA47 563 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 CCHCR1Q8TD31 782 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 TRIM31Q9BZY9 425 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 ADAM7Q9H2U9 754 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 ERVK-5Q9HDB9 667 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 DNAJC12Q9UKB3 198 aa13.13□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L11C9JVI0 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L18D6R9N7 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L22D6RA61 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L17D6RBQ6 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L19D6RCP7 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L20D6RJB6 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 TGFB1I1O43294 461 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 ECE2O60344 883 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 ATP6V1G2O95670 118 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 FOSP01100 380 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-218ENST00000537641 SHBGP04278 402 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 CIITAP33076 1130 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L24Q0WX57 530 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
CPSF7-218ENST00000537641 KIF22Q14807 665 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 TNFAIP8L3Q5GJ75 292 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 ZNF772Q68DY9 489 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-218ENST00000537641 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 CRELD2Q6UXH1 353 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-218ENST00000537641 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 UBL4BQ8N7F7 174 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 MKL1Q969V6 931 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-218ENST00000537641 AZI2Q9H6S1 392 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 LRRC4CQ9HCJ2 640 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 GOPCQ9HD26 462 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 INTS9Q9NV88 658 aaKnown RBP13.12□□□□□ -0.31
CPSF7-218ENST00000537641 GRHL1Q9NZI5 618 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 NYAP2Q9P242 653 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 PCYOX1Q9UHG3 505 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 NR2E1Q9Y466 385 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
CPSF7-218ENST00000537641 RBBP6Q7Z6E9 1792 aaKnown RBP13.11□□□□□ -0.31
CPSF7-218ENST00000537641 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 BACH1O14867 736 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 CTNNA2P26232 953 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 SLC16A2P36021 539 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 SREBF1P36956 1147 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 MMP14P50281 582 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 TAOK1Q7L7X3 1001 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 LRRC34Q8IZ02 419 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 FBXO25Q8TCJ0 367 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-218ENST00000537641 ARHGEF26Q96DR7 871 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 SCLT1Q96NL6 688 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 ROPN1BQ9BZX4 212 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-218ENST00000537641 GPR88Q9GZN0 384 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 INTS2Q9H0H0 1204 aaKnown RBP13.11□□□□□ -0.31
CPSF7-218ENST00000537641 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 ROPN1Q9HAT0 212 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-218ENST00000537641 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 SEL1LQ9UBV2 794 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 APEX2Q9UBZ4 518 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
CPSF7-218ENST00000537641 MEIS1O00470 390 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms