RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 CTSHP09668 335 aa26.72■■□□□ 1.87
HMGA2-208ENST00000537429 OSMRQ99650 979 aa26.72■■□□□ 1.87
HMGA2-208ENST00000537429 C2orf40Q9H1Z8 148 aa26.72■■□□□ 1.87
HMGA2-208ENST00000537429 TMEM39AQ9NV64 488 aa26.72■■□□□ 1.87
HMGA2-208ENST00000537429 K7ENM7 598 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 PPP1R37O75864 691 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 GCNT3O95395 438 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 PHKA2P46019 1235 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 GTF2BQ00403 316 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 ZSCAN23Q3MJ62 389 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 TRAF7Q6Q0C0 670 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 EPM2AIP1Q7L775 607 aaPredicted RBP26.71■■□□□ 1.87
HMGA2-208ENST00000537429 NOC4LQ9BVI4 516 aaKnown RBP26.71■■□□□ 1.87
HMGA2-208ENST00000537429 GTPBP4Q9BZE4 634 aaKnown RBP26.71■■□□□ 1.87
HMGA2-208ENST00000537429 PRDM5Q9NQX1 630 aaPredicted RBP26.71■■□□□ 1.87
HMGA2-208ENST00000537429 GDAQ9Y2T3 454 aa26.71■■□□□ 1.87
HMGA2-208ENST00000537429 H0YCG3 227 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 MYBP10242 640 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 SCP2P22307 547 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 EFNA5P52803 228 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 ZC2HC1CQ53FD0 456 aaPredicted RBP26.7■■□□□ 1.87
HMGA2-208ENST00000537429 SRGAP1Q7Z6B7 1085 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 ZBTB8OSQ8IWT0 167 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 GCOM2Q9BZD3 368 aaPredicted RBP26.7■■□□□ 1.87
HMGA2-208ENST00000537429 TMEM134Q9H6X4 195 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 MINDY3Q9H8M7 445 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 ALPK3Q96L96 1907 aa26.7■■□□□ 1.87
HMGA2-208ENST00000537429 DENND3A2RUS2 1198 aa26.7■■□□□ 1.86
HMGA2-208ENST00000537429 DARSP14868 501 aaKnown RBP26.7■■□□□ 1.86
HMGA2-208ENST00000537429 EIF4BP23588 611 aaKnown RBP26.7■■□□□ 1.86
HMGA2-208ENST00000537429 ALCAMQ13740 583 aa26.7■■□□□ 1.86
HMGA2-208ENST00000537429 TMEM40Q8WWA1 233 aa26.7■■□□□ 1.86
HMGA2-208ENST00000537429 CCDC113Q9H0I3 377 aa26.7■■□□□ 1.86
HMGA2-208ENST00000537429 HIPK3Q9H422 1215 aa26.7■■□□□ 1.86
HMGA2-208ENST00000537429 PCDHB13Q9Y5F0 798 aa26.7■■□□□ 1.86
HMGA2-208ENST00000537429 SIP14410 1827 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 SYCE3A1L190 88 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 K7ERI5 159 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 EIF3DO15371 548 aaKnown RBP eCLIP26.69■■□□□ 1.86
HMGA2-208ENST00000537429 SELPP16109 830 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 ABCD1P33897 745 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 MBTD1Q05BQ5 628 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 SASS6Q6UVJ0 657 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 TAS1R3Q7RTX0 852 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 SMYD4Q8IYR2 804 aaPredicted RBP26.69■■□□□ 1.86
HMGA2-208ENST00000537429 ZNF507Q8TCN5 953 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 SCFD1Q8WVM8 642 aa26.69■■□□□ 1.86
HMGA2-208ENST00000537429 IQCF3P0C7M6 154 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 COBLL1Q53SF7 1204 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 STXBP4Q6ZWJ1 553 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 LRRC8DQ7L1W4 858 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 HVCN1Q96D96 273 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 PPP1R12CQ9BZL4 782 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 INO80BQ9C086 356 aaPredicted RBP26.68■■□□□ 1.86
HMGA2-208ENST00000537429 FZD8Q9H461 694 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 UMODL1Q5DID0 1318 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 PHLPP2Q6ZVD8 1323 aa26.68■■□□□ 1.86
HMGA2-208ENST00000537429 INO80B-WBP1J3KQ70 363 aa26.67■■□□□ 1.86
HMGA2-208ENST00000537429 CSDE1O75534 798 aaKnown RBP26.67■■□□□ 1.86
HMGA2-208ENST00000537429 PRPF6O94906 941 aaKnown RBP26.67■■□□□ 1.86
HMGA2-208ENST00000537429 NLRP12P59046 1061 aa26.67■■□□□ 1.86
HMGA2-208ENST00000537429 MAPK6Q16659 721 aa26.67■■□□□ 1.86
HMGA2-208ENST00000537429 DPF3Q92784 378 aa26.67■■□□□ 1.86
HMGA2-208ENST00000537429 TBX20Q9UMR3 447 aa26.67■■□□□ 1.86
HMGA2-208ENST00000537429 SQORQ9Y6N5 450 aa26.67■■□□□ 1.86
HMGA2-208ENST00000537429 KIAA0355O15063 1070 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 PRCPP42785 496 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 KCNA1Q09470 495 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 BMT2Q1RMZ1 405 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 FBXO47Q5MNV8 452 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 C7orf61Q8IZ16 206 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 MYOCDQ8IZQ8 938 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 GUF1Q8N442 669 aaKnown RBP26.66■■□□□ 1.86
HMGA2-208ENST00000537429 OSBPL7Q9BZF2 842 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 GZF1Q9H116 711 aaPredicted RBP26.66■■□□□ 1.86
HMGA2-208ENST00000537429 MAPK8IP1Q9UQF2 711 aa26.66■■□□□ 1.86
HMGA2-208ENST00000537429 TRIM43BA6NCK2 446 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 EVI5O60447 810 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 HOXD13P35453 343 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 MBTPS1Q14703 1052 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 FAM187BQ17R55 369 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 L1TD1Q5T7N2 865 aaKnown RBP26.65■■□□□ 1.86
HMGA2-208ENST00000537429 MAP4K3Q8IVH8 894 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 TRIM43Q96BQ3 446 aaPredicted RBP26.65■■□□□ 1.86
HMGA2-208ENST00000537429 FUCA2Q9BTY2 467 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 WNT8AQ9H1J5 351 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 PRMT7Q9NVM4 692 aaPredicted RBP26.65■■□□□ 1.86
HMGA2-208ENST00000537429 PRKAG2Q9UGJ0 569 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 NOC2LQ9Y3T9 749 aaKnown RBP26.65■■□□□ 1.86
HMGA2-208ENST00000537429 UBE4BO95155 1302 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 PRKCBP05771 671 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 STRN3Q13033 797 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 PCBP1Q15365 356 aaKnown RBP eCLIP26.65■■□□□ 1.867e-7■■■■□ 22.5
HMGA2-208ENST00000537429 AMHR2Q16671 573 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 DPCR1Q3MIW9 517 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 PPP4R3CPQ6ZMV5 832 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 ADSSL1Q8N142 457 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 USP38Q8NB14 1042 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 MLKLQ8NB16 471 aa26.65■■□□□ 1.86
HMGA2-208ENST00000537429 PPP1R3GB7ZBB8 358 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms