RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 ALG13Q9NP73 1137 aaKnown RBP12.54□□□□□ -0.4
POLR1B-216ENST00000537335 SOS2Q07890 1332 aaPredicted RBP12.54□□□□□ -0.4
POLR1B-216ENST00000537335 CHL1O00533 1208 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 TJP3O95049 919 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 CALB2P22676 271 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 KCNA1Q09470 495 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 REXO1L1PQ8IX06 675 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 CD209Q9NNX6 404 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 CYP21A2P08686 494 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 HSPA1AP0DMV8 641 aaKnown RBP12.54□□□□□ -0.4
POLR1B-216ENST00000537335 HSPA1BP0DMV9 641 aaKnown RBP12.54□□□□□ -0.4
POLR1B-216ENST00000537335 TAC1P20366 129 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 NLRP9Q7RTR0 991 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 XAGE2Q96GT9 111 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 SLC38A10Q9HBR0 1119 aa12.54□□□□□ -0.4
POLR1B-216ENST00000537335 SLC4A1P02730 911 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 ENO3P13929 434 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 PPARGP37231 505 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 LONRF1Q17RB8 773 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 CLEC4FQ8N1N0 589 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 CFAP99D6REC4 459 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 HNRNPRO43390 633 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 BAIAP3O94812 1187 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 FAM58BPP0C7Q3 252 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 ATP2B4P23634 1241 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 LRRC41Q15345 812 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 TBCCQ15814 346 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 TSHZ1Q6ZSZ6 1077 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 COL23A1Q86Y22 540 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 TC2NQ8N9U0 490 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 SUN5Q8TC36 379 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 NSMCE4AQ9NXX6 385 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 LIMA1Q9UHB6 759 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 SAP30BPQ9UHR5 308 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 MAP3K5Q99683 1374 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 CDH2P19022 906 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 PTPN4P29074 926 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 HSD17B3P37058 310 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 PLOD1Q02809 727 aaPredicted RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 C1orf228Q6PIY5 440 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 EDEM3Q9BZQ6 932 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 RXFP1Q9HBX9 757 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 IPPQ9Y573 584 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 PI4K2BG5E9Z4 385 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 CPA2P48052 419 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 EIF4A2Q14240 407 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 SCN3BQ9NY72 215 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
POLR1B-216ENST00000537335 GTSE1Q9NYZ3 720 aa12.53□□□□□ -0.4
POLR1B-216ENST00000537335 PRG4Q92954 1404 aaPredicted RBP12.52□□□□□ -0.4
POLR1B-216ENST00000537335 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 A6NJR5 290 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 C6orf229H3BNL8 230 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 TNFAIP8O95379 198 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 MMP1P03956 469 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 P3H1Q32P28 736 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 SCUBE1Q8IWY4 988 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 ZBED8Q8IZ13 594 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.4
POLR1B-216ENST00000537335 SLC13A1Q9BZW2 595 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 VPS11Q9H270 941 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 KLHL31Q9H511 634 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 PPCSQ9HAB8 311 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 PLGRKTQ9HBL7 147 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 TMBIM4Q9HC24 238 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 PRDM11Q9NQV5 511 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 MBD2Q9UBB5 411 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 ASAP2O43150 1006 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 SASH3O75995 380 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 FMNL1O95466 1100 aaPredicted RBP12.52□□□□□ -0.4
POLR1B-216ENST00000537335 SRGAP2BP0DMP2 458 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 AKR1D1P51857 326 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 TUBA4AP68366 448 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 PDIA2Q13087 525 aaKnown RBP12.52□□□□□ -0.4
POLR1B-216ENST00000537335 RGS21Q2M5E4 152 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 TPH2Q8IWU9 490 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 MTERF3Q96E29 417 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 SLC10A4Q96EP9 437 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 MS4A14Q96JA4 679 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.4
POLR1B-216ENST00000537335 A1CFQ9NQ94 594 aaKnown RBP12.52□□□□□ -0.4
POLR1B-216ENST00000537335 GDAQ9Y2T3 454 aa12.52□□□□□ -0.4
POLR1B-216ENST00000537335 ABLIM1O14639 778 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
POLR1B-216ENST00000537335 P4HA1P13674 534 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms