RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 HSPA1LP34931 641 aa17.36■□□□□ 0.37
CHMP1A-202ENST00000535997 HSD17B4P51659 736 aa17.36■□□□□ 0.37
CHMP1A-202ENST00000535997 PTENP60484 403 aa17.36■□□□□ 0.37
CHMP1A-202ENST00000535997 TCEAL1Q15170 157 aa17.36■□□□□ 0.37
CHMP1A-202ENST00000535997 C12orf56Q8IXR9 622 aa17.36■□□□□ 0.37
CHMP1A-202ENST00000535997 THAP2Q9H0W7 228 aa17.36■□□□□ 0.37
CHMP1A-202ENST00000535997 KCNH7Q9NS40 1196 aa17.36■□□□□ 0.37
CHMP1A-202ENST00000535997 RBBP6Q7Z6E9 1792 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 GUCY1A3Q02108 690 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 TNIP1Q15025 636 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 DLGAP5Q15398 846 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 NIPA1Q7RTP0 329 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 MIER3Q7Z3K6 550 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 PROCA1Q8NCQ7 364 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 RAB17Q9H0T7 212 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 UBE2TQ9NPD8 197 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 DBR1Q9UK59 544 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 GOLGA6L10A0A0M3HER8 536 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 CLRN2A0PK11 232 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 K7ENM7 598 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 VAMP7P51809 220 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 SNRPFP62306 86 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 ZNF844Q08AG5 666 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 SPDYCQ5MJ68 293 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 RSBN1LQ6PCB5 846 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 ARHGEF26Q96DR7 871 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 ACCSQ96QU6 501 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 RABEP2Q9H5N1 569 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 SEPT11Q9NVA2 429 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 TAS2R14Q9NYV8 317 aa17.35■□□□□ 0.37
CHMP1A-202ENST00000535997 IGSF9BQ9UPX0 1349 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 MAPK13O15264 365 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 DCAF12L1Q5VU92 463 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 FKBP1CQ5VVH2 108 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 TMC3Q7Z5M5 1100 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 TADA2BQ86TJ2 420 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 OGFOD1Q8N543 542 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 PFASO15067 1338 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
CHMP1A-202ENST00000535997 MIF4GDA9UHW6 222 aaKnown RBP17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 PMM2O15305 246 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 DHX15O43143 795 aaKnown RBP17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 LRRN2O75325 713 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 ICAM1P05362 532 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 FLT3P36888 993 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 CAP2P40123 477 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 PTGER2P43116 358 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 DLG4P78352 724 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 PTGISQ16647 500 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 PALB2Q86YC2 1186 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 UBLCP1Q8WVY7 318 aaPredicted RBP17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 COG5Q9UP83 839 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 NR2E1Q9Y466 385 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 ALG6Q9Y672 507 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 ZHX2Q9Y6X8 837 aa17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 GOLGB1Q14789 3259 aaKnown RBP17.33■□□□□ 0.37
CHMP1A-202ENST00000535997 CPP00450 1065 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 FTLP02792 175 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 PLS3P13797 630 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 DRG2P55039 364 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 SPDYE2Q495Y8 402 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 XXYLT1Q8NBI6 393 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 ERP44Q9BS26 406 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 PAGR1Q9BTK6 254 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 CENPHQ9H3R5 247 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 ST6GALNAC4Q9H4F1 302 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 USP20Q9Y2K6 914 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 RPTORQ8N122 1335 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 ATXN2Q99700 1313 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 CNTNAP1P78357 1384 aa17.33■□□□□ 0.36
CHMP1A-202ENST00000535997 DDX39AO00148 427 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 LYPLA2O95372 231 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 QARSP47897 775 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 RARRES1P49788 294 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 MCCD1P59942 119 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 GPC5P78333 572 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 GTF2BQ00403 316 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 DR1Q01658 176 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 PPP3CAQ08209 521 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 DHX9Q08211 1270 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 EPC2Q52LR7 807 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 AGBL2Q5U5Z8 902 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 C11orf63Q6NUN7 778 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 MAEAQ7L5Y9 396 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 GMLQ99445 158 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 PCIF1Q9H4Z3 704 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 SAMM50Q9Y512 469 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 FAM187AA6NFU0 413 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 MYO1FO00160 1098 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 ERLIN2O94905 339 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 HSPA6P17066 643 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 DHX34Q14147 1143 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 GRIPAP1Q4V328 841 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 DUPD1Q68J44 220 aa17.32■□□□□ 0.36
CHMP1A-202ENST00000535997 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms