RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 FAM184BQ9ULE4 1060 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 PPP1R9AQ9ULJ8 1098 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 C2CD2Q9Y426 696 aa9.78□□□□□ -0.84
SF3B2-216ENST00000534765 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.78□□□□□ -0.84
SF3B2-216ENST00000534765 A0A1B0GTH6 734 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 LAD1O00515 517 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 LUC7L3O95232 432 aaKnown RBP9.77□□□□□ -0.84
SF3B2-216ENST00000534765 FERP16591 822 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 CYP11B2P19099 503 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 CIITAP33076 1130 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 PABPC4Q13310 644 aaKnown RBP eCLIP9.77□□□□□ -0.845e-12■■□□□ 14
SF3B2-216ENST00000534765 SYTL5Q8TDW5 730 aaPredicted RBP9.77□□□□□ -0.84
SF3B2-216ENST00000534765 PRCCQ92733 491 aaPredicted RBP9.77□□□□□ -0.84
SF3B2-216ENST00000534765 NUP58Q9BVL2 599 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.84
SF3B2-216ENST00000534765 DLGAP2Q9P1A6 1054 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 BTBD7Q9P203 1132 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 ZNF711Q9Y462 761 aa9.77□□□□□ -0.84
SF3B2-216ENST00000534765 EIF2AK2P19525 551 aaKnown RBP9.77□□□□□ -0.85
SF3B2-216ENST00000534765 USP11P51784 963 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 TXNRD2Q9NNW7 524 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 RPTORQ8N122 1335 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 H7C1D1 291 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 ATP1A1P05023 1023 aaKnown RBP9.77□□□□□ -0.85
SF3B2-216ENST00000534765 ATP4AP20648 1035 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 SP2Q02086 613 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 PDE4DQ08499 809 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 PDIA5Q14554 519 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 KCTD19Q17RG1 926 aaPredicted RBP9.77□□□□□ -0.85
SF3B2-216ENST00000534765 MIIPQ5JXC2 388 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 WLSQ5T9L3 541 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 CWF19L1Q69YN2 538 aaKnown RBP9.77□□□□□ -0.85
SF3B2-216ENST00000534765 MIS18BP1Q6P0N0 1132 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 ZNF280CQ8ND82 737 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 ZSWIM2Q8NEG5 633 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 VIPAS39Q9H9C1 493 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 HOMER3Q9NSC5 361 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
SF3B2-216ENST00000534765 SAMD15Q9P1V8 674 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 FEM1BQ9UK73 627 aa9.77□□□□□ -0.85
SF3B2-216ENST00000534765 FAM170AA1A519 330 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 GYPCP04921 128 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 ASIC1P78348 528 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 PTGISQ16647 500 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 MUM1Q2TAK8 710 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 HYIQ5T013 277 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 SPATA1Q5VX52 437 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 HSD17B14Q9BPX1 270 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 YIPF2Q9BWQ6 316 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 DACH1Q9UI36 760 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 MYH11P35749 1972 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 RBM47A0AV96 593 aaKnown RBP9.76□□□□□ -0.85
SF3B2-216ENST00000534765 SPDYE16A6NNV3 312 aaPredicted RBP9.76□□□□□ -0.85
SF3B2-216ENST00000534765 MYL1P05976 194 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 CYP3A4P08684 503 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 TUBB2AQ13885 445 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 TMEM154Q6P9G4 183 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 ZNF365Q70YC5 407 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 SDCCAG8Q86SQ7 713 aaPredicted RBP9.76□□□□□ -0.85
SF3B2-216ENST00000534765 MFN1Q8IWA4 741 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 PIAS4Q8N2W9 510 aaPredicted RBP9.76□□□□□ -0.85
SF3B2-216ENST00000534765 TRIML1Q8N9V2 468 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 KLHL29Q96CT2 875 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 DYDC2Q96IM9 177 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 FGD4Q96M96 766 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 TUBB2BQ9BVA1 445 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 VCXQ9H320 206 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 PIDD1Q9HB75 910 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 NFU1Q9UMS0 254 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 ADAMTS5Q9UNA0 930 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 SUPT3HO75486 399 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 CCNE2O96020 404 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 SOX10P56693 466 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 CNTN2Q02246 1040 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 GUCY2DQ02846 1103 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 MTA1Q13330 715 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 MAP7D1Q3KQU3 841 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 C1QTNF12Q5T7M4 302 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 AK8Q96MA6 479 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 ZIM3Q96PE6 472 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 FIZ1Q96SL8 496 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 EIF2AK1Q9BQI3 630 aaKnown RBP9.76□□□□□ -0.85
SF3B2-216ENST00000534765 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
SF3B2-216ENST00000534765 SPDYE3A6NKU9 549 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 TISP43B9A030 160 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 PLA2G6O60733 806 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 PSMC4P43686 418 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 PTPROQ16827 1216 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 CCNI2Q6ZMN8 369 aaPredicted RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 AGAP11Q8TF27 550 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 IQCGQ9H095 443 aaKnown RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 GMNCA6NCL1 334 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 A6NNZ2 444 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 GCOM1H8Y6P7 765 aaPredicted RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 DNM1LO00429 736 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 WDR46O15213 610 aaKnown RBP9.75□□□□□ -0.85
SF3B2-216ENST00000534765 AHCYL1O43865 530 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 PLA2G4BP0C869 781 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 MYZAPP0CAP1 466 aa9.75□□□□□ -0.85
SF3B2-216ENST00000534765 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms