RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 GIT1Q9Y2X7 761 aa5.51□□□□□ -1.53
ITGB1-219ENST00000534049 MRPL42Q9Y6G3 142 aaKnown RBP5.51□□□□□ -1.53
ITGB1-219ENST00000534049 A0A0U1RQG5 324 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-219ENST00000534049 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 MTSS1O43312 755 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 VSIG10L2P0DP72 767 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 BPIFB4P59827 614 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 PHC1P78364 1004 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 ATP2C1P98194 919 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-219ENST00000534049 TKFCQ3LXA3 575 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 NRN1LQ496H8 165 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 CCDC178Q5BJE1 867 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 MIIPQ5JXC2 388 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 MFSD5Q6N075 450 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 CNNM4Q6P4Q7 775 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 ESPNLQ6ZVH7 1005 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 CLEC14AQ86T13 490 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 SGMS1Q86VZ5 419 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 PLA2G15Q8NCC3 412 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 MTG2Q9H4K7 406 aa5.5□□□□□ -1.53
ITGB1-219ENST00000534049 RBM8AQ9Y5S9 174 aaKnown RBP5.5□□□□□ -1.53
ITGB1-219ENST00000534049 NRP1O14786 923 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 NRP2O60462 931 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 OPHN1O60890 802 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 HIBADHP31937 336 aaKnown RBP5.49□□□□□ -1.53
ITGB1-219ENST00000534049 LSP1P33241 339 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 LSSP48449 732 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 GPR15P49685 360 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 SMAD3P84022 425 aaKnown RBP5.49□□□□□ -1.53
ITGB1-219ENST00000534049 FOXE3Q13461 319 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 USP39Q53GS9 565 aaKnown RBP5.49□□□□□ -1.53
ITGB1-219ENST00000534049 KRT40Q6A162 431 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF662Q6ZS27 426 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 JAZF1Q86VZ6 243 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 ANKRD53Q8N9V6 530 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 SMC1BQ8NDV3 1235 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 RSAD2Q8WXG1 361 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 MYL10Q9BUA6 226 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 MTFR1LQ9H019 292 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 POFUT1Q9H488 388 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 ZMAT4Q9H898 229 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 TLR9Q9NR96 1032 aa5.49□□□□□ -1.53
ITGB1-219ENST00000534049 THG1LQ9NWX6 298 aaKnown RBP5.49□□□□□ -1.53
ITGB1-219ENST00000534049 CUL7Q14999 1698 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 CAPN14A8MX76 684 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 APOL3O95236 402 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 AMHP03971 560 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 ANTXR2P58335 489 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 DALRD3Q5D0E6 543 aaKnown RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 DHX37Q8IY37 1157 aaKnown RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF808Q8N4W9 903 aaPredicted RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 CDYL2Q8N8U2 506 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF610Q8N9Z0 462 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 IPO4Q8TEX9 1081 aaKnown RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 CHTF18Q8WVB6 975 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 RTF1Q92541 710 aaKnown RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 FERMT2Q96AC1 680 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 MIEF2Q96C03 454 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 NOL10Q9BSC4 688 aaKnown RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 TARS2Q9BW92 718 aaKnown RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF703Q9H7S9 590 aaPredicted RBP5.48□□□□□ -1.53
ITGB1-219ENST00000534049 IL23AQ9NPF7 189 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 KCNG1Q9UIX4 513 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 RCAN3Q9UKA8 241 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 MAPRE3Q9UPY8 281 aa5.48□□□□□ -1.53
ITGB1-219ENST00000534049 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 C2orf78A6NCI8 922 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 FAM83GA6ND36 823 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF891A8MT65 544 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-219ENST00000534049 AKAP8O43823 692 aaKnown RBP5.47□□□□□ -1.53
ITGB1-219ENST00000534049 TOX4O94842 621 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 FSHBP01225 129 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 XPAP23025 273 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-219ENST00000534049 ACVRL1P37023 503 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 IL2P60568 153 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 C1orf210Q8IVY1 113 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 UNC5BQ8IZJ1 945 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 NXPE1Q8N323 547 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 SLC16A11Q8NCK7 471 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF503Q96F45 646 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 UIMC1Q96RL1 719 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 ZNF341Q9BYN7 854 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 AGO3Q9H9G7 860 aaKnown RBP5.47□□□□□ -1.53
ITGB1-219ENST00000534049 PARPBPQ9NWS1 579 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 DNAI1Q9UI46 699 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 ADCY10Q96PN6 1610 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 ARID4BQ4LE39 1312 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-219ENST00000534049 MYPNQ86TC9 1320 aa5.47□□□□□ -1.53
ITGB1-219ENST00000534049 IPO13O94829 963 aaKnown RBP5.46□□□□□ -1.54
ITGB1-219ENST00000534049 PEX11BO96011 259 aa5.46□□□□□ -1.54
ITGB1-219ENST00000534049 KIR2DL3P43628 341 aa5.46□□□□□ -1.54
ITGB1-219ENST00000534049 NRG3P56975 720 aa5.46□□□□□ -1.54
ITGB1-219ENST00000534049 PTH1RQ03431 593 aa5.46□□□□□ -1.54
ITGB1-219ENST00000534049 CRHR2Q13324 411 aa5.46□□□□□ -1.54
ITGB1-219ENST00000534049 SAFB2Q14151 953 aaKnown RBP eCLIP5.46□□□□□ -1.54
ITGB1-219ENST00000534049 C21orf62-AS1Q17RA5 79 aa5.46□□□□□ -1.54
ITGB1-219ENST00000534049 FAM111BQ6SJ93 734 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms