RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SMG8Q8ND04 991 aaKnown RBP10.75□□□□□ -0.69
SSBP3-215ENST00000533946 RABGGTAQ92696 567 aa10.75□□□□□ -0.69
SSBP3-215ENST00000533946 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-215ENST00000533946 SAMD11Q96NU1 681 aa10.75□□□□□ -0.69
SSBP3-215ENST00000533946 MMTAG2Q9BU76 263 aaKnown RBP10.75□□□□□ -0.69
SSBP3-215ENST00000533946 C11orf84Q9BUA3 381 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-215ENST00000533946 KIFC3Q9BVG8 833 aa10.75□□□□□ -0.69
SSBP3-215ENST00000533946 APOL5Q9BWW9 433 aa10.75□□□□□ -0.69
SSBP3-215ENST00000533946 FOXP1Q9H334 677 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-215ENST00000533946 BRMS1Q9HCU9 246 aa10.75□□□□□ -0.69
SSBP3-215ENST00000533946 C1orf112Q9NSG2 853 aa10.75□□□□□ -0.69
SSBP3-215ENST00000533946 BARX2Q9UMQ3 279 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-215ENST00000533946 INPP5FQ9Y2H2 1132 aa10.75□□□□□ -0.69
SSBP3-215ENST00000533946 TSPAN1O60635 241 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 OFD1O75665 1012 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 LYPLA2O95372 231 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 BAG4O95429 457 aaKnown RBP10.74□□□□□ -0.69
SSBP3-215ENST00000533946 RB1P06400 928 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 OR52Z1P0C646 297 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 GRIN1Q05586 938 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 MBTD1Q05BQ5 628 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 PTGDRQ13258 359 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 ADAM15Q13444 863 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 RABEP1Q15276 862 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 LEXMQ3ZCV2 418 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 PLPP4Q5VZY2 271 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 TWF2Q6IBS0 349 aaKnown RBP10.74□□□□□ -0.69
SSBP3-215ENST00000533946 PTCRAQ6ISU1 281 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-215ENST00000533946 KCNT2Q6UVM3 1135 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 TAS1R1Q7RTX1 841 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 PABPC5Q96DU9 382 aaKnown RBP10.74□□□□□ -0.69
SSBP3-215ENST00000533946 PLIN2Q99541 437 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 TMEM117Q9H0C3 514 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 GBP3Q9H0R5 595 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 POLR3FQ9H1D9 316 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-215ENST00000533946 NRDE2Q9H7Z3 1164 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-215ENST00000533946 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 AGPAT5Q9NUQ2 364 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 FAM105AQ9NUU6 356 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 COG5Q9UP83 839 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 PCDHB2Q9Y5E7 798 aa10.74□□□□□ -0.69
SSBP3-215ENST00000533946 FAM86C2PA6NEL3 165 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 E9PMD0 336 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 FSCN2O14926 492 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 RPLP2P05387 115 aaKnown RBP10.73□□□□□ -0.69
SSBP3-215ENST00000533946 ZSCAN20P17040 1043 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-215ENST00000533946 DNM2P50570 870 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 BCAR1P56945 870 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 PTENP60484 403 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 FAM173BQ6P4H8 233 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 ZNF410Q86VK4 478 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 FAM184AQ8NB25 1140 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
SSBP3-215ENST00000533946 SLC7A3Q8WY07 619 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 P2RX5Q93086 422 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 MSLNLQ96KJ4 702 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 ZFP42Q96MM3 310 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 MTRQ99707 1265 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 PLVAPQ9BX97 442 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 NXF3Q9H4D5 531 aaKnown RBP10.73□□□□□ -0.69
SSBP3-215ENST00000533946 ELAC1Q9H777 363 aaKnown RBP10.73□□□□□ -0.69
SSBP3-215ENST00000533946 C11orf16Q9NQ32 467 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 ANKEF1Q9NU02 776 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 TBC1D13Q9NVG8 400 aa10.73□□□□□ -0.69
SSBP3-215ENST00000533946 TRIP11Q15643 1979 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 POMCP01189 267 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 WEE2P0C1S8 567 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 MYBP10242 640 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 ARF4P18085 180 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-215ENST00000533946 AKAP5P24588 427 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 RFC5P40937 340 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 SLC11A1P49279 550 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 HMGN5P82970 282 aaKnown RBP10.72□□□□□ -0.69
SSBP3-215ENST00000533946 SAFBQ15424 915 aaKnown RBP eCLIP10.72□□□□□ -0.69
SSBP3-215ENST00000533946 PTPROQ16827 1216 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 TIGD5Q53EQ6 642 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 EEF1DP3Q658K8 133 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 MCTP1Q6DN14 999 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 LLGL2Q6P1M3 1020 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 MRPL10Q7Z7H8 261 aaKnown RBP10.72□□□□□ -0.69
SSBP3-215ENST00000533946 FAM178BQ8IXR5 827 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 THNSL1Q8IYQ7 743 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 DAW1Q8N136 415 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 SLC39A11Q8N1S5 342 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 GSTCDQ8NEC7 633 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 B3GALT6Q96L58 329 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 PNMA5Q96PV4 448 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 RUSC1Q9BVN2 902 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 BACH2Q9BYV9 841 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.72□□□□□ -0.69
SSBP3-215ENST00000533946 KLK14Q9P0G3 267 aa10.72□□□□□ -0.69
SSBP3-215ENST00000533946 NPHP3-ACAD11A0A0J9YXS1 232 aa10.71□□□□□ -0.69
SSBP3-215ENST00000533946 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
SSBP3-215ENST00000533946 INO80B-WBP1J3KQ70 363 aa10.71□□□□□ -0.69
SSBP3-215ENST00000533946 MBTPS2O43462 519 aa10.71□□□□□ -0.69
SSBP3-215ENST00000533946 ZC3H11AO75152 810 aaKnown RBP eCLIP10.71□□□□□ -0.691e-8■□□□□ 9.1
SSBP3-215ENST00000533946 GALTP07902 379 aa10.71□□□□□ -0.69
SSBP3-215ENST00000533946 LIG1P18858 919 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms