RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 IL23AQ9NPF7 189 aa15.54■□□□□ 0.08
CMTM1-218ENST00000533915 RMND1Q9NWS8 449 aa15.54■□□□□ 0.08
CMTM1-218ENST00000533915 SFI1A8K8P3 1242 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 K7ERI5 159 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 TRAK2O60296 914 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 EFCAB14O75071 495 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 CXCL10P02778 98 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 CSF2RAP15509 400 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-218ENST00000533915 STRN3Q13033 797 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 ALCAMQ13740 583 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 LPIN1Q14693 890 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 CDCA2Q69YH5 1023 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-218ENST00000533915 PSRC1Q6PGN9 363 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-218ENST00000533915 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 DEFB128Q7Z7B8 93 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 PRIMPOLQ96LW4 560 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 MTIF3Q9H2K0 278 aaKnown RBP15.53■□□□□ 0.08
CMTM1-218ENST00000533915 MRPL44Q9H9J2 332 aaKnown RBP15.53■□□□□ 0.08
CMTM1-218ENST00000533915 IFT122Q9HBG6 1241 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 EXOC1Q9NV70 894 aa15.53■□□□□ 0.08
CMTM1-218ENST00000533915 PRMT7Q9NVM4 692 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-218ENST00000533915 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
CMTM1-218ENST00000533915 FRMD3A2A2Y4 597 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 NBNO60934 754 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 ZSCAN20P17040 1043 aaPredicted RBP15.52■□□□□ 0.08
CMTM1-218ENST00000533915 ITGB8P26012 769 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 AXLP30530 894 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 NFX1Q12986 1120 aaKnown RBP15.52■□□□□ 0.08
CMTM1-218ENST00000533915 PSMD2Q13200 908 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 CUL4BQ13620 913 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 IKBKEQ14164 716 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 TMEM132AQ24JP5 1023 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 PLEKHG4Q58EX7 1191 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 CNKSR3Q6P9H4 555 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 APBB1IPQ7Z5R6 666 aaPredicted RBP15.52■□□□□ 0.08
CMTM1-218ENST00000533915 BSNDQ8WZ55 320 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 ZNF668Q96K58 619 aaPredicted RBP15.52■□□□□ 0.08
CMTM1-218ENST00000533915 BLZF1Q9H2G9 400 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 TMEM134Q9H6X4 195 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 CDHR5Q9HBB8 845 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 POLD4Q9HCU8 107 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 CHST12Q9NRB3 414 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 OLFML3Q9NRN5 406 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 PADI3Q9ULW8 664 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 NOC2LQ9Y3T9 749 aaKnown RBP15.52■□□□□ 0.08
CMTM1-218ENST00000533915 PCDHB13Q9Y5F0 798 aa15.52■□□□□ 0.08
CMTM1-218ENST00000533915 H0YGN5 161 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 K7ENM7 598 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 SLC16A4O15374 487 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 FGBP02675 491 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 RPN1P04843 607 aaKnown RBP15.51■□□□□ 0.07
CMTM1-218ENST00000533915 CD52P31358 61 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 NCKAP1LP55160 1127 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 MDM2Q00987 491 aaPredicted RBP15.51■□□□□ 0.07
CMTM1-218ENST00000533915 MBTPS1Q14703 1052 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 HAUS6Q7Z4H7 955 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 SFR1Q86XK3 245 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 GRAMD1CQ8IYS0 662 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 SMARCE1Q969G3 411 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 HVCN1Q96D96 273 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 GSDMAQ96QA5 445 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 ST6GALNAC4Q9H4F1 302 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 ARHGAP28Q9P2N2 729 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 ST3GAL5Q9UNP4 418 aa15.51■□□□□ 0.07
CMTM1-218ENST00000533915 LTBP2Q14767 1821 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 SCN5AQ14524 2016 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 ABHD14A-ACY1A0A1B0GW23 586 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 DENND3A2RUS2 1198 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 BAIAP3O94812 1187 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 KIF20AO95235 890 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 PRKCBP05771 671 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 MAGEA10P43363 369 aaPredicted RBP15.5■□□□□ 0.07
CMTM1-218ENST00000533915 MBTD1Q05BQ5 628 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 DPYDQ12882 1025 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 COASYQ13057 564 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 PRPF4BQ13523 1007 aaKnown RBP15.5■□□□□ 0.07
CMTM1-218ENST00000533915 FAM187BQ17R55 369 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 FAM26FQ5R3K3 315 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 FAM228AQ86W67 206 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 TMEM161BQ8NDZ6 487 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 DBF4BQ8NFT6 615 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 TMEM40Q8WWA1 233 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 KCNN1Q92952 543 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 SYAP1Q96A49 352 aaPredicted RBP15.5■□□□□ 0.07
CMTM1-218ENST00000533915 CCDC51Q96ER9 411 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 MRPL4Q9BYD3 311 aaKnown RBP15.5■□□□□ 0.07
CMTM1-218ENST00000533915 NUP62CLQ9H1M0 184 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 ERVK-5Q9HDB9 667 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 EXOC7Q9UPT5 735 aa15.5■□□□□ 0.07
CMTM1-218ENST00000533915 TNRC18O15417 2968 aaPredicted RBP15.49■□□□□ 0.07
CMTM1-218ENST00000533915 ACKR2O00590 384 aa15.49■□□□□ 0.07
CMTM1-218ENST00000533915 GCNT3O95395 438 aa15.49■□□□□ 0.07
CMTM1-218ENST00000533915 SKIP12755 728 aa15.49■□□□□ 0.07
CMTM1-218ENST00000533915 PNOCQ13519 176 aa15.49■□□□□ 0.07
CMTM1-218ENST00000533915 KCNB1Q14721 858 aa15.49■□□□□ 0.07
CMTM1-218ENST00000533915 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
CMTM1-218ENST00000533915 NOTUMQ6P988 496 aa15.49■□□□□ 0.07
CMTM1-218ENST00000533915 ZNF720Q7Z2F6 126 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms