RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 BMS1Q14692 1282 aaKnown RBP24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 CALCRLQ16602 461 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 LONRF3Q496Y0 759 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 TCP11Q8WWU5 503 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 TNFRSF25Q93038 417 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 IFT122Q9HBG6 1241 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 FAM105AQ9NUU6 356 aa24.89■■□□□ 1.58
TRAPPC4-210ENST00000531290 BTBD18B2RXH4 712 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 ASAP2O43150 1006 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 GAS2O43903 313 aaKnown RBP24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 BCAR1P56945 870 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 SPIRE1Q08AE8 756 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 LAMTOR4Q0VGL1 99 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 SRGAP1Q7Z6B7 1085 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 DIS3L2Q8IYB7 885 aaKnown RBP24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 SLC39A11Q8N1S5 342 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 LPPQ93052 612 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 PGBD4Q96DM1 585 aa24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 BMP2KQ9NSY1 1161 aaPredicted RBP24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 USP15Q9Y4E8 981 aaPredicted RBP24.88■■□□□ 1.57
TRAPPC4-210ENST00000531290 HIDE1A8MVS5 230 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 JAK2O60674 1132 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 ZNF623O75123 536 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 SLITRK3O94933 977 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 FOSBP53539 338 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 RBM10P98175 930 aaKnown RBP24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 EMC2Q15006 297 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 VN1R2Q8NFZ6 395 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 FAM122AQ96E09 287 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 TMEM169Q96HH4 297 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 EIF2AK1Q9BQI3 630 aaKnown RBP24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 AGPAT5Q9NUQ2 364 aa24.87■■□□□ 1.57
TRAPPC4-210ENST00000531290 LOXHD1Q8IVV2 1947 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 CARNS1A5YM72 827 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 NT5C1B-RDH14C9J2C7 533 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 ZBTB39O15060 712 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 RNASELQ05823 741 aaKnown RBP24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 SMC1AQ14683 1233 aaKnown RBP24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 NOMO2Q5JPE7 1267 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 TMEM184AQ6ZMB5 413 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 RNF135Q8IUD6 432 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 MRPL43Q8N983 215 aaKnown RBP24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 TTC12Q9H892 705 aaPredicted RBP24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 INPP5FQ9Y2H2 1132 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 ARIH1Q9Y4X5 557 aaPredicted RBP24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 PCDHB2Q9Y5E7 798 aa24.86■■□□□ 1.57
TRAPPC4-210ENST00000531290 NEMFO60524 1076 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 ZC3H11AO75152 810 aaKnown RBP eCLIP24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 CA8P35219 290 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 TECP42680 631 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 TXKP42681 527 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 SAFBQ15424 915 aaKnown RBP eCLIP24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 LLGL2Q6P1M3 1020 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 FERMT3Q86UX7 667 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 RNF149Q8NC42 400 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 MTRQ99707 1265 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 MUTYHQ9UIF7 546 aa24.85■■□□□ 1.57
TRAPPC4-210ENST00000531290 OFD1O75665 1012 aa24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 SEC24BO95487 1268 aa24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 PLA2G5P39877 138 aa24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 MXD4Q14582 209 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 TMEM87AQ8NBN3 555 aa24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 URGCPQ8TCY9 931 aa24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 CCDC43Q96MW1 224 aaKnown RBP24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 HSD17B14Q9BPX1 270 aa24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 PHF7Q9BWX1 381 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 TBC1D13Q9NVG8 400 aa24.84■■□□□ 1.57
TRAPPC4-210ENST00000531290 CXCL14O95715 111 aa24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 NCBP1Q09161 790 aaKnown RBP24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 KCNC3Q14003 757 aa24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 HERC4Q5GLZ8 1057 aaPredicted RBP24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 ANKRD54Q6NXT1 300 aa24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 MINDY3Q9H8M7 445 aa24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 ANKEF1Q9NU02 776 aa24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 LIMCH1Q9UPQ0 1083 aa24.83■■□□□ 1.57
TRAPPC4-210ENST00000531290 C2orf71A6NGG8 1288 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 MEIS3P2A8K0S8 358 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 LOC730098B7Z3J9 87 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 ERLIN2O94905 339 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 LYPLA2O95372 231 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 HOXB8P17481 243 aaPredicted RBP24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 TFDP1Q14186 410 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 VPS52Q8N1B4 723 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 CASP10Q92851 521 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 RPGRIP1Q96KN7 1286 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 GBP3Q9H0R5 595 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 NRDE2Q9H7Z3 1164 aa24.82■■□□□ 1.56
TRAPPC4-210ENST00000531290 FNDC1Q4ZHG4 1894 aaPredicted RBP24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 GALTP07902 379 aa24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 ATP2B1P20020 1258 aa24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 HOXA11P31270 313 aaPredicted RBP24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 PCBP1Q15365 356 aaKnown RBP eCLIP24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 MRPL10Q7Z7H8 261 aaKnown RBP24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 SUSD6Q92537 303 aa24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 IGSF21Q96ID5 467 aa24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 MTMR9Q96QG7 549 aa24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 S1PR5Q9H228 398 aa24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 KANSL3Q9P2N6 904 aa24.81■■□□□ 1.56
TRAPPC4-210ENST00000531290 DGAT1O75907 488 aa24.8■■□□□ 1.56
TRAPPC4-210ENST00000531290 GUCY1B3Q02153 619 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms