RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PMS2P54278 862 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 ROR1Q01973 937 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 CDKL3Q8IVW4 592 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 TIPINQ9BVW5 301 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 ADAMTS1Q9UHI8 967 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 FSCBQ5H9T9 825 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 MFSD14CQ5VZR4 134 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 TRIM72Q6ZMU5 477 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 GANCQ8TET4 914 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 ALKBH8Q96BT7 664 aaKnown RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 KLHL29Q96CT2 875 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 SUCLA2Q9P2R7 463 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 A0A087WUV0 522 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 FCER1AP12319 257 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 DMTNQ08495 405 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 LLGL1Q15334 1064 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 VPS39Q96JC1 886 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 MMTAG2Q9BU76 263 aaKnown RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 CA4P22748 312 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 TXNRD1Q16881 649 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 PPP6R3Q5H9R7 873 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 KCNV1Q6PIU1 500 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 EPM2AIP1Q7L775 607 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 PRPF38AQ8NAV1 312 aaKnown RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 SNF8Q96H20 258 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 FGD4Q96M96 766 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 PLA2G12BQ9BX93 195 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 NGRNQ9NPE2 291 aaKnown RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 CREB3O43889 395 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 POTEIP0CG38 1075 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 ACAD11Q709F0 780 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 FRMD5Q7Z6J6 570 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 TRIM62Q9BVG3 475 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 RPAP3Q9H6T3 665 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 DNAJC17Q9NVM6 304 aaKnown RBP9.04□□□□□ -0.96
CTNND1-227ENST00000530748 INPP5FQ9Y2H2 1132 aa9.04□□□□□ -0.96
CTNND1-227ENST00000530748 ASB14A6NK59 587 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 GSG1L2A8MUP6 293 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 PYGBP11216 843 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 HOXD10P28358 340 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 COPS2P61201 443 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 ZNF394Q53GI3 561 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 CDC26Q8NHZ8 85 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 MAGEB5Q9BZ81 275 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 SLC13A4Q9UKG4 626 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 CFLARO15519 480 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 KRT38O76015 456 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 MMEP08473 750 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 HDLBPQ00341 1268 aaKnown RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 QRICH1Q2TAL8 776 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 ITPRIPL1Q6GPH6 555 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 AFG1LQ8WV93 481 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 RUBCNQ92622 972 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TRPV6Q9H1D0 765 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 APOEP02649 317 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 SMARCA1P28370 1054 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 ESRRGP62508 458 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 ATP2C1P98194 919 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.03□□□□□ -0.964e-16■□□□□ 9.4
CTNND1-227ENST00000530748 HEMGNQ9BXL5 484 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 UPF3AQ9H1J1 476 aaKnown RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 SLC9A2Q9UBY0 812 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 HERC5Q9UII4 1024 aaKnown RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 STAP1Q9ULZ2 295 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TRIM33Q9UPN9 1127 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 USP31Q70CQ4 1352 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 KDM6AO15550 1401 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 ASAP2O43150 1006 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 SRGAP2O75044 1071 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 KRT7P08729 469 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 ZFXP17010 805 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 CHRNA3P32297 505 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 DRAP1Q14919 205 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TKFCQ3LXA3 575 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 RASIP1Q5U651 963 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 PDXDC1Q6P996 788 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 SYT2Q8N9I0 419 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TTC8Q8TAM2 541 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 CCDC138Q96M89 665 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TRIM55Q9BYV6 548 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 PARVAQ9NVD7 372 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TMEM247A6NEH6 219 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 ADORA2BP29275 332 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 SDC4P31431 198 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TMPRSS15P98073 1019 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 AP1B1Q10567 949 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 RBBP7Q16576 425 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 EFHC2Q5JST6 749 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TEX2Q8IWB9 1127 aa9.03□□□□□ -0.96
CTNND1-227ENST00000530748 TTC17Q96AE7 1141 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms