RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SRRM1Q8IYB3 904 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 ELOA2Q8IYF1 753 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 ZNF564Q8TBZ8 553 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 DBR1Q9UK59 544 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 FANCGO15287 622 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 IRX4P78413 519 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 IFRD2Q12894 506 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 STRIP1Q5VSL9 837 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 APOBEC3HQ6NTF7 200 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 TBC1D1Q86TI0 1168 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 FMNL3Q8IVF7 1028 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 DAGLBQ8NCG7 672 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 SLC20A1Q8WUM9 679 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 RSAD2Q8WXG1 361 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 MSTO1Q9BUK6 570 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 GLIS2Q9BZE0 524 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 TRIM6Q9C030 488 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 FAM114A2Q9NRY5 505 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 KCNH7Q9NS40 1196 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 ANAPC5Q9UJX4 755 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 YWHABP31946 246 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 FLAD1Q8NFF5 587 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 CASKIN2Q8WXE0 1202 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 DHX38Q92620 1227 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 MED1Q15648 1581 aaPredicted RBP13.28□□□□□ -0.28
SCN3B-206ENST00000530277 SSU72P8A0A1W2PR75 194 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
SCN3B-206ENST00000530277 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
SCN3B-206ENST00000530277 GPC5P78333 572 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 MIIPQ5JXC2 388 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 AADACL2Q6P093 401 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 SRLQ86TD4 932 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 CBWD2Q8IUF1 395 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 C4orf32Q8N8J7 132 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 C9orf72Q96LT7 481 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 RNF14Q9UBS8 474 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 PNMA2Q9UL42 364 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 LRRC10BA6NIK2 292 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 ZNF233A6NK53 670 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 MMEP08473 750 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 BASP1P80723 227 aaKnown RBP13.28□□□□□ -0.28
SCN3B-206ENST00000530277 SLC35G1Q2M3R5 365 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 FRMD5Q7Z6J6 570 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 ATG4AQ8WYN0 398 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 HOMER3Q9NSC5 361 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 HSPBP1Q9NZL4 362 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 NYAP2Q9P242 653 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 NALCNQ8IZF0 1738 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 KRT1P04264 644 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 NAB2Q15742 525 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 PALM2Q8IXS6 379 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 TSEN2Q8NCE0 465 aaKnown RBP13.28□□□□□ -0.28
SCN3B-206ENST00000530277 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.28□□□□□ -0.28
SCN3B-206ENST00000530277 SPATA20Q8TB22 786 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 TAAR1Q96RJ0 339 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 RPAP3Q9H6T3 665 aaPredicted RBP13.28□□□□□ -0.28
SCN3B-206ENST00000530277 ALG6Q9Y672 507 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 MAD1L1Q9Y6D9 718 aa13.28□□□□□ -0.28
SCN3B-206ENST00000530277 PPP1R11O60927 126 aaPredicted RBP13.27□□□□□ -0.28
SCN3B-206ENST00000530277 RXRBP28702 533 aa13.27□□□□□ -0.28
SCN3B-206ENST00000530277 RWDD2BP57060 319 aa13.27□□□□□ -0.28
SCN3B-206ENST00000530277 RFFLQ8WZ73 363 aa13.27□□□□□ -0.28
SCN3B-206ENST00000530277 KAT5Q92993 513 aa13.27□□□□□ -0.28
SCN3B-206ENST00000530277 ZKSCAN4Q969J2 545 aaPredicted RBP13.27□□□□□ -0.28
SCN3B-206ENST00000530277 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.28
SCN3B-206ENST00000530277 ALG13Q9NP73 1137 aaKnown RBP13.27□□□□□ -0.28
SCN3B-206ENST00000530277 APEX2Q9UBZ4 518 aa13.27□□□□□ -0.28
SCN3B-206ENST00000530277 ZNF70Q9UC06 446 aaPredicted RBP13.27□□□□□ -0.28
SCN3B-206ENST00000530277 CSADQ9Y600 493 aa13.27□□□□□ -0.28
SCN3B-206ENST00000530277 MRC1P22897 1456 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 ESYT2A0FGR8 921 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 ZNF263O14978 683 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 RPS6P62753 249 aaKnown RBP13.27□□□□□ -0.29
SCN3B-206ENST00000530277 BBS9Q3SYG4 887 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 MCTP2Q6DN12 878 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 HHIPL2Q6UWX4 724 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 TRIM59Q8IWR1 403 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 MSANTD4Q8NCY6 345 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 ZNF507Q8TCN5 953 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 AGPAT1Q99943 283 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 PPP1R12CQ9BZL4 782 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 AGPAT3Q9NRZ7 376 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 SAT1P21673 171 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 YWHAGP61981 247 aaKnown RBP eCLIP13.27□□□□□ -0.29
SCN3B-206ENST00000530277 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
SCN3B-206ENST00000530277 SYT2Q8N9I0 419 aaPredicted RBP13.27□□□□□ -0.29
SCN3B-206ENST00000530277 WDR64B1ANS9 1081 aa13.26□□□□□ -0.29
SCN3B-206ENST00000530277 COMTP21964 271 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms