RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 KIF22Q14807 665 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 TUBB8Q3ZCM7 444 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 CEP85LQ5SZL2 805 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 FMNL3Q8IVF7 1028 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 IL31RAQ8NI17 732 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 CCDC26Q8TAB7 109 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 ATP6V1G3Q96LB4 118 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 RNPC3Q96LT9 517 aaKnown RBP11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 AGPAT1Q99943 283 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 CELF4Q9BZC1 486 aaKnown RBP11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 DEFB129Q9H1M3 183 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 SLITRK6Q9H5Y7 841 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 LARSQ9P2J5 1176 aaKnown RBP11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 ZHX2Q9Y6X8 837 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
AP002008.3-201ENST00000528614 ANKRD62A6NC57 917 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 NFIBO00712 420 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 FLT3P36888 993 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 VAMP7P51809 220 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 CORO7P57737 925 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 UAP1Q16222 522 aaPredicted RBP11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 TMEM206Q9H813 350 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 TMBIM4Q9HC24 238 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 TTC7AQ9ULT0 858 aaPredicted RBP11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 NR2E1Q9Y466 385 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 ZNF536O15090 1300 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 ICAM1P05362 532 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 BCRP11274 1271 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 PPP3CAQ08209 521 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 PRPF4BQ13523 1007 aaKnown RBP11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 TNIP1Q15025 636 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 EMC10Q5UCC4 262 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 DCAF12L1Q5VU92 463 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 NAA35Q5VZE5 725 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 LRIG3Q6UXM1 1119 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 ARHGEF19Q8IW93 802 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 C1orf131Q8NDD1 294 aaKnown RBP11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 ZSWIM2Q8NEG5 633 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 SLC20A1Q8WUM9 679 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 LRRC45Q96CN5 670 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 ACCSQ96QU6 501 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 SH2D3AQ9BRG2 576 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 CBWD1Q9BRT8 395 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 COG5Q9UP83 839 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 DAAM1Q9Y4D1 1078 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 RBBP6Q7Z6E9 1792 aaKnown RBP11.38□□□□□ -0.59
AP002008.3-201ENST00000528614 H0YGN5 161 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 EBAG9O00559 213 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 ZEB2O60315 1214 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 MAPTP10636 758 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 NR1D1P20393 614 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 GCLMP48507 274 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 RARRES1P49788 294 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 ITGB3BPQ13352 177 aaPredicted RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 TKFCQ3LXA3 575 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 INTS8Q75QN2 995 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 LARGE2Q8N3Y3 721 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 OR2W6PQ8NHA6 318 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 AGO4Q9HCK5 861 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 DBR1Q9UK59 544 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 DIS3Q9Y2L1 958 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 NFS1Q9Y697 457 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 PLS3P13797 630 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 RFX1P22670 979 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 MAGEA9P43362 315 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 GUCY1A3Q02108 690 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 C1orf220Q5T0J3 134 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 TRMT1LQ7Z2T5 733 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 ADAT2Q7Z6V5 191 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 CPXCR1Q8N123 301 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 DPH5Q9H2P9 285 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 CENPHQ9H3R5 247 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 ZNF277Q9NRM2 450 aaPredicted RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 UTP11Q9Y3A2 253 aaKnown RBP11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 UBIAD1Q9Y5Z9 338 aa11.37□□□□□ -0.59
AP002008.3-201ENST00000528614 TMEM150BA6NC51 233 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 FTLP02792 175 aaPredicted RBP11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 CTNNA1P35221 906 aaKnown RBP11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 QARSP47897 775 aaKnown RBP11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 MRPS9P82933 396 aaKnown RBP11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 CETN1Q12798 172 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 ZNF211Q13398 564 aaPredicted RBP11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 ALCAMQ13740 583 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 EPC2Q52LR7 807 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 NIPA1Q7RTP0 329 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 RPUSD2Q8IZ73 545 aaKnown RBP11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 PLEKHO2Q8TD55 490 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 UBLCP1Q8WVY7 318 aaPredicted RBP11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 ZNF341Q9BYN7 854 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 HSPBP1Q9NZL4 362 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 GOLGA6L10A6NI86 522 aa11.36□□□□□ -0.59
AP002008.3-201ENST00000528614 ASNSP08243 561 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms