RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 PDGFBP01127 241 aaPredicted RBP23.42■■□□□ 1.34
PKP3-205ENST00000527442 SP100P23497 879 aaPredicted RBP23.42■■□□□ 1.34
PKP3-205ENST00000527442 AVPR2P30518 371 aa23.42■■□□□ 1.34
PKP3-205ENST00000527442 ZNF76P36508 570 aa23.42■■□□□ 1.34
PKP3-205ENST00000527442 TECP42680 631 aa23.42■■□□□ 1.34
PKP3-205ENST00000527442 PDE12Q6L8Q7 609 aaKnown RBP23.42■■□□□ 1.34
PKP3-205ENST00000527442 SYCE2Q6PIF2 218 aa23.42■■□□□ 1.34
PKP3-205ENST00000527442 TMEM184AQ6ZMB5 413 aa23.42■■□□□ 1.34
PKP3-205ENST00000527442 FAM228AQ86W67 206 aa23.42■■□□□ 1.34
PKP3-205ENST00000527442 CCDC60Q8IWA6 550 aaPredicted RBP23.42■■□□□ 1.34
PKP3-205ENST00000527442 MTMR9Q96QG7 549 aa23.42■■□□□ 1.34
PKP3-205ENST00000527442 FBXO2Q9UK22 296 aaPredicted RBP23.42■■□□□ 1.34
PKP3-205ENST00000527442 ZFHX2Q9C0A1 2572 aaPredicted RBP23.41■■□□□ 1.34
PKP3-205ENST00000527442 CFAP54Q96N23 3096 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 MEIS1O00470 390 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 GFRA3O60609 400 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 LAG3P18627 525 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 CALCRLQ16602 461 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 KIZQ2M2Z5 673 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 LLGL2Q6P1M3 1020 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 ABHD15Q6UXT9 468 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 MRPS27Q92552 414 aaKnown RBP23.41■■□□□ 1.34
PKP3-205ENST00000527442 OSMRQ99650 979 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 ATP6V0A4Q9HBG4 840 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 LMBRD1Q9NUN5 540 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 RNF216Q9NWF9 866 aaPredicted RBP23.41■■□□□ 1.34
PKP3-205ENST00000527442 TMEM161AQ9NX61 479 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 CDH22Q9UJ99 828 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 LZTS1Q9Y250 596 aa23.41■■□□□ 1.34
PKP3-205ENST00000527442 SRPRBQ9Y5M8 271 aaKnown RBP23.41■■□□□ 1.34
PKP3-205ENST00000527442 HIDE1A8MVS5 230 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 GPR182O15218 404 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 SRGAP2BP0DMP2 458 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 PTMSP20962 102 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 MARCKSP29966 332 aaPredicted RBP23.4■■□□□ 1.34
PKP3-205ENST00000527442 ME1P48163 572 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 DSC3Q14574 896 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 PRR16Q569H4 304 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 ODR4Q5SWX8 454 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 FAM160B1Q5W0V3 765 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 FAM43BQ6ZT52 329 aaPredicted RBP23.4■■□□□ 1.34
PKP3-205ENST00000527442 KRI1Q8N9T8 703 aaKnown RBP23.4■■□□□ 1.34
PKP3-205ENST00000527442 ETNPPLQ8TBG4 499 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 TCF25Q9BQ70 676 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 ENTPD7Q9NQZ7 604 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 PCDHA7Q9UN72 937 aa23.4■■□□□ 1.34
PKP3-205ENST00000527442 CUTAO60888 179 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 C22orf31O95567 290 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 ATP4AP20648 1035 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 FAM189BP81408 668 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 PLCB3Q01970 1234 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 NFKBIBQ15653 356 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 ZNF484Q5JVG2 852 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 AXDND1Q5T1B0 1012 aaPredicted RBP23.39■■□□□ 1.33
PKP3-205ENST00000527442 PDXDC2PQ6P474 469 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 LRRC55Q6ZSA7 311 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 PLA2G4DQ86XP0 818 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 ZNF302Q9NR11 478 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 RNF19AQ9NV58 838 aa23.39■■□□□ 1.33
PKP3-205ENST00000527442 MYO10Q9HD67 2058 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 PRPF40AO75400 957 aaKnown RBP23.38■■□□□ 1.33
PKP3-205ENST00000527442 VTNP04004 478 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 PBX3P40426 434 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 CRYBB1P53674 252 aaPredicted RBP23.38■■□□□ 1.33
PKP3-205ENST00000527442 ADALQ6DHV7 355 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 ZBTB33Q86T24 672 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 SLFN12Q8IYM2 578 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 ZNF579Q8NAF0 562 aaKnown RBP23.38■■□□□ 1.33
PKP3-205ENST00000527442 HAS1Q92839 578 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 ATOH1Q92858 354 aaPredicted RBP23.38■■□□□ 1.33
PKP3-205ENST00000527442 FAM20AQ96MK3 541 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 TMEM117Q9H0C3 514 aa23.38■■□□□ 1.33
PKP3-205ENST00000527442 ELAC1Q9H777 363 aaKnown RBP23.38■■□□□ 1.33
PKP3-205ENST00000527442 A0A1W2PQ27 194 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 A0A1W2PQ64 194 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 A0A1W2PQD8 194 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 MSH4O15457 936 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 UBE2HP62256 183 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 KCNT2Q6UVM3 1135 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 RIPOR3Q96MK2 946 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 CASD1Q96PB1 797 aa23.37■■□□□ 1.33
PKP3-205ENST00000527442 H0Y858 1186 aa23.36■■□□□ 1.33
PKP3-205ENST00000527442 DHX15O43143 795 aaKnown RBP23.36■■□□□ 1.33
PKP3-205ENST00000527442 GPR32O75388 356 aa23.36■■□□□ 1.33
PKP3-205ENST00000527442 FXR2P51116 673 aaKnown RBP eCLIP23.36■■□□□ 1.331e-6■□□□□ 9.4
PKP3-205ENST00000527442 IL17AQ16552 155 aa23.36■■□□□ 1.33
PKP3-205ENST00000527442 SWSAP1Q6NVH7 229 aa23.36■■□□□ 1.33
PKP3-205ENST00000527442 DTHD1Q6ZMT9 781 aa23.36■■□□□ 1.33
PKP3-205ENST00000527442 SLC5A5Q92911 643 aa23.36■■□□□ 1.33
PKP3-205ENST00000527442 NGRNQ9NPE2 291 aaKnown RBP23.36■■□□□ 1.33
PKP3-205ENST00000527442 PUF60Q9UHX1 559 aaKnown RBP23.36■■□□□ 1.33
PKP3-205ENST00000527442 GADD45BO75293 160 aaPredicted RBP23.35■■□□□ 1.33
PKP3-205ENST00000527442 HOXB8P17481 243 aaPredicted RBP23.35■■□□□ 1.33
PKP3-205ENST00000527442 MIS18BP1Q6P0N0 1132 aa23.35■■□□□ 1.33
PKP3-205ENST00000527442 KREMEN2Q8NCW0 462 aa23.35■■□□□ 1.33
PKP3-205ENST00000527442 ZNF558Q96NG5 402 aa23.35■■□□□ 1.33
PKP3-205ENST00000527442 VWA3AA6NCI4 1184 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 PPM1AP35813 382 aa23.34■■□□□ 1.33
PKP3-205ENST00000527442 LONP1P36776 959 aaKnown RBP23.34■■□□□ 1.33
PKP3-205ENST00000527442 CLCN3P51790 818 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms